RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 PigrO70570 771 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Klc1O88447 541 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Inpp5jP59644 1003 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Alkbh5Q3TSG4 395 aaKnown RBP12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Itga3Q62470 1053 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 SrlQ7TQ48 910 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Efcab14Q8BGQ6 484 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Wdr59Q8C0M0 992 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Zfp446Q8C9M8 523 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Hmgcll1Q8JZS7 343 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Traf3ip2Q8N7N6 555 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Pdik1lQ8QZR7 341 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Prss23Q9D6X6 382 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Pak1ip1Q9DCE5 382 aaKnown RBP12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Dnajb2Q9QYI5 324 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Plxna3P70208 1872 aa12.78□□□□□ -0.36
Lig3-202ENSMUST00000080461 Gm29133A0A1B0GT72 266 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Bclaf3A2AG58 752 aaKnown RBP12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Gm16430A6X8J1 155 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Pbx3O35317 434 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Axin1O35625 863 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Apobec1P51908 229 aaKnown RBP12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Upf3aQ3ULJ3 422 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Taok1Q5F2E8 1001 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Ksr1Q61097 873 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Nlrp4eQ66X19 978 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Zfp512bQ6PHP4 879 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Slc9a7Q8BLV3 726 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Neu4Q8BZL1 478 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Zfp62Q8C827 914 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 MgarpQ8VI64 283 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 PlvapQ91VC4 438 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Ppa2Q91VM9 330 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Pcdhb19Q91Y01 801 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Lpin1Q91ZP3 924 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Decr1Q9CQ62 335 aaKnown RBP12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 MceeQ9D1I5 178 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Slxl1Q9D515 155 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 PnkpQ9JLV6 522 aaKnown RBP12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Tk2Q9R088 270 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Clcn2Q9R0A1 908 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Aldh18a1Q9Z110 795 aa12.77□□□□□ -0.36
Lig3-202ENSMUST00000080461 Gm5936A2BG95 728 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Gm5640A3KG49 728 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Gm5689F6Y2A6 97 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Gm3424L7N298 263 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Gm8246M0QWX9 263 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Aldh1a1P24549 501 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Ripk2P58801 539 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Drc1Q3USS3 753 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Cnga4Q3UW12 575 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Grid1Q61627 1009 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Mvb12bQ6KAU4 317 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Rd3Q8BRE0 195 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 CgasQ8C6L5 507 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Clp1Q99LI9 425 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Cyp4v2Q9DBW0 525 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Syde1Q9DBZ9 737 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Rassf7Q9DD19 359 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 NumbQ9QZS3 653 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Wdr54Q9R0D8 334 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Vmn2r25W4VSP2 855 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Ccdc170D3YXL0 722 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Spata31E9QAF0 1014 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Rpl21O09167 160 aaKnown RBP12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Atxn1lP0C7T6 687 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Npas2P97460 816 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Slc17a7Q3TXX4 560 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Abl2Q4JIM5 1182 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Fnip2Q80TD3 1108 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Slc7a4Q8BLQ7 635 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 RbakQ8BQC8 711 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 GancQ8BVW0 898 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 CtbsQ8R242 366 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Agap3Q8VHH5 910 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Ccdc103Q9D9P2 237 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Tle2Q9WVB2 767 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 Pex11bQ9Z210 259 aa12.77□□□□□ -0.37
Lig3-202ENSMUST00000080461 HttP42859 3119 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Kiaa0100Q5SYL3 2234 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Adamts6D3Z1A5 1117 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Mroh5E9PUJ8 762 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 E230025N22RikG5E8S3 482 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Olfm3P63056 478 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Ccdc61Q3UJV1 511 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Ccdc33Q3ULW6 985 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Cdkn3Q810P3 211 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Spdye4bQ8CDE8 236 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Slc25a3Q8VEM8 357 aaKnown RBP12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Zfp617Q91WM0 559 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Gemin2Q9CQQ4 269 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Golga1Q9CW79 758 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Tmco5aQ9D9D5 303 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 QkiQ9QYS9 341 aaKnown RBP12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Dpysl2O08553 572 aaKnown RBP12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 P01878 344 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Gja8P28236 440 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Flt3lgP49772 232 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Gbp1Q01514 589 aa12.76□□□□□ -0.37
Lig3-202ENSMUST00000080461 Fam81aQ3UXZ6 364 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms