RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 RANBP17Q9H2T7 1088 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 SLC40A1Q9NP59 571 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 DNAJC14Q6Y2X3 702 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 FBXO16Q8IX29 292 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 SPATA4Q8NEY3 305 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 MANSC1Q9H8J5 431 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 GBA2Q9HCG7 927 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 ZNRF3Q9ULT6 936 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 AP4S1Q9Y587 144 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 DBIP07108 87 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 CHRNB3Q05901 458 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 GPAT3Q53EU6 434 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 ARHGEF40Q8TER5 1519 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 GPD1P21695 349 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 PDX1P52945 283 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 ATP6AP1LQ52LC2 224 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 FMR1NBQ8N0W7 255 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 MYH8P13535 1937 aa16.7■□□□□ 0.26
CACNA1A-258ENST00000638029 PDE9AO76083 593 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 BTN3A2P78410 334 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 QKIQ96PU8 341 aaKnown RBP eCLIP16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 KCNN2Q9H2S1 579 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 MCCC2Q9HCC0 563 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 LOC100506127A0A0U1RQW1 187 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 SSNA1O43805 119 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 VHLP40337 213 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 RMI1Q9H9A7 625 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 FAM50BQ9Y247 325 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 RWDD3Q9Y3V2 267 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 EFCAB10A6NFE3 127 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PGM3O95394 542 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 SERPINA3P01011 423 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 TSPAN19P0C672 248 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 AP1S2P56377 157 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 ABATP80404 500 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 MADCAM1Q13477 382 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 KPNB1Q14974 876 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 NEDD8Q15843 81 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PKN2Q16513 984 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 TRPV3Q8NET8 790 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 MCOLN3Q8TDD5 553 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 KLHL28Q9NXS3 571 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 COMMD9Q9P000 198 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PDXKO00764 312 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 THP07101 528 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 CTNNB1P35222 781 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 EZH2Q15910 746 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PPP1R10Q96QC0 940 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 KCNK16Q96T55 309 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 REEP2Q9BRK0 252 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PHF11Q9UIL8 331 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 ENTPD4Q9Y227 616 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 ANGPT4Q9Y264 503 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 SLC16A3O15427 465 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 ECDO95905 644 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 RAP1GAP2Q684P5 730 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 MCEMP1Q8IX19 187 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PAK5Q9P286 719 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PIK3CDO00329 1044 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PSTPIP1O43586 416 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 RCAN1P53805 252 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 TMEM26Q6ZUK4 368 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 KLHL2O95198 593 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 LINC00523Q86TU6 105 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 SRBD1Q8N5C6 995 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PJA1Q8NG27 643 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 ELOVL6Q9H5J4 265 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 PXMP2Q9NR77 195 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 OR10H1Q9Y4A9 318 aa16.69■□□□□ 0.26
CACNA1A-258ENST00000638029 MYH3P11055 1940 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 MAGEA13PA6NCF6 341 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 LSM1O15116 133 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 EPHX2P34913 555 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 ADGRF2Q8IZF7 708 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 KLHL32Q96NJ5 620 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 UBE2OQ9C0C9 1292 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 GLI2P10070 1586 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 TSNQ15631 228 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 DENND1BQ6P3S1 775 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 AGGF1Q8N302 714 aaeCLIP16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 SMYD1Q8NB12 490 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 FAM172AQ8WUF8 416 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 DKK3Q9UBP4 350 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 TRIM49D1C9J1S8 452 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 IL1BP01584 269 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 TFPIP10646 304 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 AP5B1Q2VPB7 878 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 ZC2HC1CQ53FD0 456 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 EFHC1Q5JVL4 640 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 PPP1R26Q5T8A7 1209 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 NAT16Q8N8M0 369 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 PMEPA1Q969W9 287 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 GRIP2Q9C0E4 1043 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 GSG1L2A8MUP6 293 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 DCLK1O15075 740 aa16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 PABPC1P11940 636 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-258ENST00000638029 EPORP19235 508 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms