RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 EPB41L1Q9H4G0 881 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 BUD23O43709 281 aaKnown RBP18.49■□□□□ 0.55
RAB40C-203ENST00000535977 ZBED1O96006 694 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 CYP2C8P10632 490 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 IL4RP24394 825 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 CPA2P48052 419 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 SLC18A2Q05940 514 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 PTK7Q13308 1070 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 MED21Q13503 144 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 CYLC2Q14093 348 aaPredicted RBP18.49■□□□□ 0.55
RAB40C-203ENST00000535977 EFTUD2Q15029 972 aaKnown RBP eCLIP18.49■□□□□ 0.557e-7■■■■■ 38.1
RAB40C-203ENST00000535977 GRIK4Q16099 956 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 PPP1R26Q5T8A7 1209 aaPredicted RBP18.49■□□□□ 0.55
RAB40C-203ENST00000535977 SCYL2Q6P3W7 929 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 C1orf228Q6PIY5 440 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 RBM44Q6ZP01 1051 aaKnown RBP18.49■□□□□ 0.55
RAB40C-203ENST00000535977 MOB2Q70IA6 237 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 RASSF3Q86WH2 238 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 CHSY1Q86X52 802 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 CDKL3Q8IVW4 592 aaPredicted RBP18.49■□□□□ 0.55
RAB40C-203ENST00000535977 FAM172AQ8WUF8 416 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 TSPAN18Q96SJ8 248 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 PRDM16Q9HAZ2 1276 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 RAB6BQ9NRW1 208 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 INIPQ9NRY2 104 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 NDUFA13Q9P0J0 144 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 ZNF180Q9UJW8 692 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 SLC45A1Q9Y2W3 748 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 CITO14578 2027 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 PLXNA1Q9UIW2 1896 aa18.49■□□□□ 0.55
RAB40C-203ENST00000535977 TCRBV9S1A1TA0A576 114 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 DCAF8L1A6NGE4 600 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 KCNN4O15554 427 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 PIM1P11309 404 aaPredicted RBP18.48■□□□□ 0.55
RAB40C-203ENST00000535977 HOXD8P13378 290 aaPredicted RBP18.48■□□□□ 0.55
RAB40C-203ENST00000535977 ADORA2AP29274 412 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 PTPN9P43378 593 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 NR2C2P49116 596 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 AP2B1P63010 937 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 CDO1Q16878 200 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 SLC44A4Q53GD3 710 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 PMF1Q6P1K2 205 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 OR6Y1Q8NGX8 325 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 PANX3Q96QZ0 392 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 PPP1R16BQ96T49 567 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 NGRNQ9NPE2 291 aaKnown RBP18.48■□□□□ 0.55
RAB40C-203ENST00000535977 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.48■□□□□ 0.55
RAB40C-203ENST00000535977 WDR91A4D1P6 747 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 BTBD19C9JJ37 291 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 YWHAGP61981 247 aaKnown RBP eCLIP18.48■□□□□ 0.55
RAB40C-203ENST00000535977 ZBTB16Q05516 673 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 SLC26A11Q86WA9 606 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 PDSS2Q86YH6 399 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 ARHGAP24Q8N264 748 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 LRRC43Q8N309 656 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 GAB3Q8WWW8 586 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 OXCT2Q9BYC2 517 aaPredicted RBP18.48■□□□□ 0.55
RAB40C-203ENST00000535977 GCOM2Q9BZD3 368 aaPredicted RBP18.48■□□□□ 0.55
RAB40C-203ENST00000535977 MANSC1Q9H8J5 431 aa18.48■□□□□ 0.55
RAB40C-203ENST00000535977 UNCXA6NJT0 531 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 LPXNO60711 386 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 CD97P48960 835 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 ZBTB6Q15916 424 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 LRRC36Q1X8D7 754 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 TTC39BQ5VTQ0 682 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-203ENST00000535977 SLC27A1Q6PCB7 646 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 TTC7BQ86TV6 843 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 LRRC6Q86X45 466 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 PQLC3Q8N755 202 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 C12orf29Q8N999 325 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 APOPT1Q96IL0 206 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 ADAM33Q9BZ11 813 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 SNX9Q9Y5X1 595 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 KBTBD13C9JR72 458 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 BOLA2-SMG1P6H3BVE0 249 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 TGDSO95455 350 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 ZNF286BP0CG31 522 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 ADRA1DP25100 572 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 GJA8P48165 433 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 RGS7P49802 495 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 GJC2Q5T442 439 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-203ENST00000535977 TTC30AQ86WT1 665 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 SKA1Q96BD8 255 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 CLPTM1LQ96KA5 538 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 SNX27Q96L92 541 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 CORO1BQ9BR76 489 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 SIKE1Q9BRV8 207 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 SNRNP25Q9BV90 132 aaKnown RBP18.47■□□□□ 0.55
RAB40C-203ENST00000535977 ARHGEF4Q9NR80 690 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 ZNF711Q9Y462 761 aa18.47■□□□□ 0.55
RAB40C-203ENST00000535977 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-203ENST00000535977 E2F6O75461 281 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 GRAP2O75791 330 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 KRT37O76014 449 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 IL1BP01584 269 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 DHRS4L1P0CG22 281 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 ACADSBP45954 432 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 DGKDQ16760 1214 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 KBTBD12Q3ZCT8 623 aa18.46■□□□□ 0.55
RAB40C-203ENST00000535977 SFT2D3Q587I9 215 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms