RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 MFSD4BQ5TF39 518 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 C19orf18Q8NEA5 215 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TLCD1Q96CP7 247 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 Q96MT0 163 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 AGAP3Q96P47 875 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 CDRT15Q96T59 188 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 POLD4Q9HCU8 107 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 VTA1Q9NP79 307 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNF180Q9UJW8 692 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 BARX2Q9UMQ3 279 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 GMEB1Q9Y692 573 aa6.3□□□□□ -1.4
PRPF4B-205ENST00000480058 TK2O00142 265 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TBC1D12O60347 775 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TFE3P19532 575 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 NFKB1P19838 968 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CLCN5P51795 746 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 HABP4Q5JVS0 413 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 BICRALQ6AI39 1079 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 NEK5Q6P3R8 708 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TMC7Q7Z402 723 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ANKS1BQ7Z6G8 1248 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SNX32Q86XE0 403 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SPATA2LQ8IUW3 424 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CNTD1Q8N815 330 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SNX31Q8N9S9 440 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM13CQ8NE31 585 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ATG4AQ8WYN0 398 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CENPIQ92674 756 aaPredicted RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 QRFPRQ96P65 431 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ZNF670Q9BS34 389 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ADGRE3Q9BY15 652 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 NUAK2Q9H093 628 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 MOV10Q9HCE1 1003 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CD320Q9NPF0 282 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 OLA1Q9NTK5 396 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 DDIT4Q9NX09 232 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 PTBP2Q9UKA9 531 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RAB26Q9ULW5 256 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 BCS1LQ9Y276 419 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 KDM6BO15054 1643 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CYP3A7-CYP3A51PA0A087WV96 503 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 MEI4A8MW99 385 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CYTH3O43739 400 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 UMPSP11172 480 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RAG1P15918 1043 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CYP3A7P24462 503 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ALDH1A3P47895 512 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SLC11A2P49281 568 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 NFIXQ14938 502 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 PDK3Q15120 406 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 DGKDQ16760 1214 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CLNKQ7Z7G1 428 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 PACRGLQ8N7B6 248 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RXFP2Q8WXD0 754 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RNFT2Q96EX2 444 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 WRNIP1Q96S55 665 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CBWD1Q9BRT8 395 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 KRT84Q9NSB2 600 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ADPRHL2Q9NX46 363 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SH3GLB1Q9Y371 365 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 A0A0A0MRY4 1105 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RGS5O15539 181 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ALDH1A1P00352 501 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TCF3P15923 654 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 OGNP20774 298 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CES1P23141 567 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SLC1A6P48664 564 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 NEK3P51956 506 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TGM3Q08188 693 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TRAF3Q13114 568 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 KRT33BQ14525 404 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SQLEQ14534 574 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 DDR2Q16832 855 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM83AQ86UY5 434 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ATG16L2Q8NAA4 619 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TDRD5Q8NAT2 981 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 IPMKQ8NFU5 416 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SLC16A10Q8TF71 515 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SLCO2A1Q92959 643 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 GLMNQ92990 594 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 TMEM176AQ96HP8 235 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SPATA13Q96N96 652 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 PPP1R10Q96QC0 940 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 DEPDC7Q96QD5 511 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 CLPBQ9H078 707 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 ELOVL6Q9H5J4 265 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 WWOXQ9NZC7 414 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 PIM2Q9P1W9 311 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 MADDQ8WXG6 1647 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 MYO5CQ9NQX4 1742 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 RBM47A0AV96 593 aaKnown RBP6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SPDYE5A6NIY4 337 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SIGLEC16A6NMB1 481 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 MYO1GB0I1T2 1018 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 SUPT3HB4E1H0 165 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 KBTBD13C9JR72 458 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 HOXA2O43364 376 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 MTA2O94776 668 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 EGFRP00533 1210 aa6.29□□□□□ -1.4
PRPF4B-205ENST00000480058 FAM153BP0C7A2 387 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms