RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 FOXR2Q6PJQ5 311 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 CHST9Q7L1S5 443 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 RABEPKQ7Z6M1 372 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 KIAA0907Q7Z7F0 614 aaPredicted RBP25.5■■□□□ 1.67
PTCH1-210ENST00000468211 FOXJ1Q92949 421 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 MIS12Q9H081 205 aa25.5■■□□□ 1.67
PTCH1-210ENST00000468211 UPK3BL1B0FP48 263 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 C1QTNF9BB2RNN3 333 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 UPK3BL2E5RIL1 263 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 C1QTNF9P0C862 333 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 CD59P13987 128 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 FAM193AP78312 1265 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 GCNT1Q02742 428 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 PLEKHG6Q3KR16 790 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 FAM133BQ5BKY9 247 aaKnown RBP25.49■■□□□ 1.67
PTCH1-210ENST00000468211 HDDC3Q8N4P3 179 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 PRCCQ92733 491 aaPredicted RBP25.49■■□□□ 1.67
PTCH1-210ENST00000468211 MYEOVQ96EZ4 313 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 TMEM245Q9H330 911 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 ASPMQ8IZT6 3477 aa25.49■■□□□ 1.67
PTCH1-210ENST00000468211 ZFHX4Q86UP3 3567 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 OPHN1O60890 802 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 CD70P32970 193 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 CAMK2GQ13555 558 aaPredicted RBP25.48■■□□□ 1.67
PTCH1-210ENST00000468211 STILQ15468 1287 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 PTPRNQ16849 979 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 WDR45BQ5MNZ6 344 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 SYCP2LQ5T4T6 812 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 PIK3R6Q5UE93 754 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 NADSYN1Q6IA69 706 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.48■■□□□ 1.67
PTCH1-210ENST00000468211 DNASE2BQ8WZ79 361 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 HSFY1Q96LI6 401 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 INTS2Q9H0H0 1204 aaKnown RBP25.48■■□□□ 1.67
PTCH1-210ENST00000468211 SLC32A1Q9H598 525 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 DNAAF2Q9NVR5 837 aaKnown RBP25.48■■□□□ 1.67
PTCH1-210ENST00000468211 GGA2Q9UJY4 613 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 CFAP47Q6ZTR5 3102 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 IGF2RP11717 2491 aa25.48■■□□□ 1.67
PTCH1-210ENST00000468211 BICDL2A1A5D9 508 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 GJB3O75712 270 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 IGLV3-19P01714 112 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 PABPC1P11940 636 aaKnown RBP25.47■■□□□ 1.67
PTCH1-210ENST00000468211 MARSP56192 900 aaKnown RBP25.47■■□□□ 1.67
PTCH1-210ENST00000468211 TBX4P57082 545 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 ZNF445P59923 1031 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 ARID5AQ03989 594 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 CETN1Q12798 172 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 FNDC3BQ53EP0 1204 aaKnown RBP25.47■■□□□ 1.67
PTCH1-210ENST00000468211 FAM124AQ86V42 546 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 SCUBE3Q8IX30 993 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 WFIKKN2Q8TEU8 576 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 SCNM1Q9BWG6 230 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 SRRTQ9BXP5 876 aaKnown RBP25.47■■□□□ 1.67
PTCH1-210ENST00000468211 TMEM121BQ9BXQ6 578 aaPredicted RBP25.47■■□□□ 1.67
PTCH1-210ENST00000468211 CNTN6Q9UQ52 1028 aa25.47■■□□□ 1.67
PTCH1-210ENST00000468211 MEI4A8MW99 385 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 ACSL4O60488 711 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 TBL1XO60907 577 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 AFPP02771 609 aaKnown RBP25.46■■□□□ 1.67
PTCH1-210ENST00000468211 SYPP08247 313 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 GPD2P43304 727 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 RPL34P49207 117 aaKnown RBP25.46■■□□□ 1.67
PTCH1-210ENST00000468211 SIM1P81133 766 aaPredicted RBP25.46■■□□□ 1.67
PTCH1-210ENST00000468211 RING1Q06587 406 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 PAK1Q13153 545 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 DCAF12L1Q5VU92 463 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 MBLAC2Q68D91 279 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 DENND1BQ6P3S1 775 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 ZCCHC9Q8N567 271 aaKnown RBP25.46■■□□□ 1.67
PTCH1-210ENST00000468211 CADM4Q8NFZ8 388 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 OR2T3Q8NH03 318 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 DQX1Q8TE96 717 aaKnown RBP25.46■■□□□ 1.67
PTCH1-210ENST00000468211 LMLNQ96KR4 655 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 FCRL2Q96LA5 508 aaPredicted RBP25.46■■□□□ 1.67
PTCH1-210ENST00000468211 PRICKLE1Q96MT3 831 aaPredicted RBP25.46■■□□□ 1.67
PTCH1-210ENST00000468211 CAMK1GQ96NX5 476 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 SUSD2Q9UGT4 822 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 NAALADL1Q9UQQ1 740 aa25.46■■□□□ 1.67
PTCH1-210ENST00000468211 KNL1Q8NG31 2342 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 METTL12A8MUP2 240 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 FBXO21O94952 628 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 PROS1P07225 676 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 OXTRP30559 389 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 GRIK2Q13002 908 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 E2F5Q15329 346 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 NUGGCQ68CJ6 796 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 UNQ6494/PRO21346Q6UXR6 183 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 UNC45BQ8IWX7 931 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 AHI1Q8N157 1196 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 ADAM32Q8TC27 787 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 NUP58Q9BVL2 599 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 MIR1-1HGQ9H1L0 117 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 ACP6Q9NPH0 428 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 STIM2Q9P246 746 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 PLA2G4CQ9UP65 541 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.45■■□□□ 1.66
PTCH1-210ENST00000468211 SLCO1B1Q9Y6L6 691 aa25.45■■□□□ 1.66
PTCH1-210ENST00000468211 CHD6Q8TD26 2715 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 ACADMP11310 421 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms