RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 RNF180Q86T96 592 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 ZDHHC17Q8IUH5 632 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 CPXM1Q96SM3 734 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 DDX50Q9BQ39 737 aaKnown RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 ADNPQ9H2P0 1102 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 PRDM12Q9H4Q4 367 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 NCKIPSDQ9NZQ3 722 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 LSM7Q9UK45 103 aaKnown RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 DCXO43602 365 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 NR2C2P49116 596 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 ELF3P78545 371 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 POU4F1Q01851 419 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 CLEC4FQ8N1N0 589 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 SH3TC2Q8TF17 1288 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 CINPQ9BW66 212 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 UBE2OQ9C0C9 1292 aaKnown RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 THAP1Q9NVV9 213 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 ARHGAP28Q9P2N2 729 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 COL1A1P02452 1464 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 MEI4A8MW99 385 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 ZNF197O14709 1029 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 TRIM13O60858 407 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 LTFP02788 710 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 SERPINE1P05121 402 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 KRT16P08779 473 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 PSMB4P28070 264 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 TUBP50607 506 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 CDH17Q12864 832 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 ZNF177Q13360 481 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 MARC1Q5VT66 337 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 PDPK2PQ6A1A2 396 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 POLNQ7Z5Q5 900 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 ZNF410Q86VK4 478 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 KCNMB4Q86W47 210 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 DACT3Q96B18 629 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 LGMNQ99538 433 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 TKTL2Q9H0I9 626 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 TCF7L2Q9NQB0 619 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 PCDHGB4Q9UN71 923 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 FARP1Q9Y4F1 1045 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 FAM237BA0A1B0GVD1 139 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 ERI2A8K979 691 aaKnown RBP14.79□□□□□ -0.04
SCARB2-216ENST00000639300 XPO1O14980 1071 aaKnown RBP14.79□□□□□ -0.04
SCARB2-216ENST00000639300 NCAM2O15394 837 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 CYBBP04839 570 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 LAMB3Q13751 1172 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 MFN1Q8IWA4 741 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 ARHGAP18Q8N392 663 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 TDRD5Q8NAT2 981 aaKnown RBP14.79□□□□□ -0.04
SCARB2-216ENST00000639300 OR52K1Q8NGK4 314 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 CYGBQ8WWM9 190 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 CNDP1Q96KN2 507 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 XPNPEP1Q9NQW7 623 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 SUFUQ9UMX1 484 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 DTNAQ9Y4J8 743 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 ITGAVP06756 1048 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 MMP13P45452 471 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 ALDH7A1P49419 539 aaKnown RBP14.79□□□□□ -0.04
SCARB2-216ENST00000639300 SCNN1BP51168 640 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 SLC45A4Q5BKX6 768 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 SNX30Q5VWJ9 437 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCARB2-216ENST00000639300 TMPRSS6Q8IU80 811 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 USP13Q92995 863 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-216ENST00000639300 CCDC134Q9H6E4 229 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 SLC13A4Q9UKG4 626 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 H0Y626 953 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 PDE5AO76074 875 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 C4BPAP04003 597 aaKnown RBP14.79□□□□□ -0.04
SCARB2-216ENST00000639300 ACADSP16219 412 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 PTPN1P18031 435 aaKnown RBP14.79□□□□□ -0.04
SCARB2-216ENST00000639300 CDC25CP30307 473 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 ADSSP30520 456 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 ALDH1A3P47895 512 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 PSEN2P49810 448 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 ZNF470Q6ECI4 717 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 CXCL17Q6UXB2 119 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 NT5DC4Q86YG4 428 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 SH3KBP1Q96B97 665 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 TINF2Q9BSI4 451 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 NRDE2Q9H7Z3 1164 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 CAAP1Q9H8G2 361 aa14.79□□□□□ -0.04
SCARB2-216ENST00000639300 F5H5T6 163 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 SLC11A2P49281 568 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 RGS4P49798 205 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 JAG1P78504 1218 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 SPIRE1Q08AE8 756 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 NFE2Q16621 373 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-216ENST00000639300 FUT11Q495W5 492 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 SLC30A9Q6PML9 568 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 WNT8BQ93098 351 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 BTBD10Q9BSF8 475 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 SYNDIG1LA6NDD5 238 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 KCNK10P57789 538 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 CYLC2Q14093 348 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-216ENST00000639300 SNX17Q15036 470 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 AGKQ53H12 422 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 TCHHL1Q5QJ38 904 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-216ENST00000639300 PPP1R26Q5T8A7 1209 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms