RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 TRPM5Q9NZQ8 1165 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 PSMD11O00231 422 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 PRKAA1Q13131 559 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 MARK2Q7KZI7 788 aaKnown RBP11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 TRMT13Q9NUP7 481 aaKnown RBP11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 H3BQF6 201 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 FCHO1O14526 889 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 PLOD3O60568 738 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 KPNA6O60684 536 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 TADA2AO75478 443 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 GTF2H1P32780 548 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 C5orf22Q49AR2 442 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 STK32CQ86UX6 486 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 SLC26A11Q86WA9 606 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ZC3H13Q5T200 1668 aaKnown RBP11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 LRRC7Q96NW7 1537 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 PSMG1O95456 288 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 SERPINE1P05121 402 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 NRF1Q16656 503 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 ACAD10Q6JQN1 1059 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 EPB41L1Q9H4G0 881 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 CHORDC1Q9UHD1 332 aaPredicted RBP11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 CES2O00748 559 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 RNF19BQ6ZMZ0 732 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 HEG1Q9ULI3 1381 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 RPS6KA5O75582 802 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 PERM1Q5SV97 790 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 Q96MT0 163 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 REEP1Q9H902 201 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 CROTQ9UKG9 612 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 NDUFAF1Q9Y375 327 aa11.77□□□□□ -0.52
PCDHA4-204ENST00000618834 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 YY1P25490 414 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 PGBD2Q6P3X8 592 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 TRPV3Q8NET8 790 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 PFDN2Q9UHV9 154 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 FGRP09769 529 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 PTDSS1P48651 473 aaKnown RBP11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 PRKAA2P54646 552 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 TIGD7Q6NT04 549 aaPredicted RBP11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 KBTBD2Q8IY47 623 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 TCAIMQ8N3R3 496 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 KLHL32Q96NJ5 620 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 CLN6Q9NWW5 311 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 ATXN10Q9UBB4 475 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 ABT1Q9ULW3 272 aaKnown RBP11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 ME2P23368 584 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 SGMS1Q86VZ5 419 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 CCDC28BQ9BUN5 200 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 LRRC40Q9H9A6 602 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 IQGAP3Q86VI3 1631 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 MUTP22033 750 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 SMCO1Q147U7 214 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 FNDC5Q8NAU1 212 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 KLHL23Q8NBE8 558 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 ORAI2Q96SN7 254 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 MKNK1Q9BUB5 465 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 PSIP1O75475 530 aaKnown RBP11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 RBBP4Q09028 425 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 ACAP1Q15027 740 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 INO80DQ53TQ3 878 aaPredicted RBP11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 CLYBLQ8N0X4 340 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 ATG4AQ8WYN0 398 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 ACSF2Q96CM8 615 aaPredicted RBP11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 KRT36O76013 467 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 ACADLP28330 430 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 IL12AP29459 219 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 BST2Q10589 180 aaKnown RBP11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 TAF5Q15542 800 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 CCDC3Q9BQI4 270 aa11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.53
PCDHA4-204ENST00000618834 A0A0X1KG70 313 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 BOLA3Q53S33 107 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 L2HGDHQ9H9P8 463 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 CRTAMO95727 393 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 ARHGDIBP52566 201 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 GRAPQ13588 217 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 GRAPLQ8TC17 118 aaPredicted RBP11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 CPNE1Q99829 537 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 THAP2Q9H0W7 228 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 AP3M1Q9Y2T2 418 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 MYMKA6NI61 221 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 MFSD14CQ5VZR4 134 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 CYP2R1Q6VVX0 501 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 CHPFQ8IZ52 775 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 ZKSCAN4Q969J2 545 aaPredicted RBP11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 REPS1Q96D71 796 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 USP18Q9UMW8 372 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 MYCP01106 439 aaPredicted RBP11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 CAPGP40121 348 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 SKIV2L2P42285 1042 aaKnown RBP11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 NEK3P51956 506 aa11.76□□□□□ -0.53
PCDHA4-204ENST00000618834 SLC15A2Q16348 729 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms