RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CNGA2Q16280 664 aa10.75□□□□□ -0.69
MARK3-213ENST00000558611 FAM109BQ6ICB4 259 aaPredicted RBP10.75□□□□□ -0.69
MARK3-213ENST00000558611 MIER3Q7Z3K6 550 aa10.75□□□□□ -0.69
MARK3-213ENST00000558611 RPAINQ86UA6 219 aa10.75□□□□□ -0.69
MARK3-213ENST00000558611 TRAPPC12Q8WVT3 735 aa10.75□□□□□ -0.69
MARK3-213ENST00000558611 DYDC2Q96IM9 177 aa10.75□□□□□ -0.69
MARK3-213ENST00000558611 MRGPRX4Q96LA9 322 aa10.75□□□□□ -0.69
MARK3-213ENST00000558611 FTOQ9C0B1 505 aaKnown RBP eCLIP10.75□□□□□ -0.69
MARK3-213ENST00000558611 FOXP1Q9H334 677 aaPredicted RBP10.75□□□□□ -0.69
MARK3-213ENST00000558611 POLR3BQ9NW08 1133 aaPredicted RBP10.75□□□□□ -0.69
MARK3-213ENST00000558611 YBX2Q9Y2T7 364 aaKnown RBP10.75□□□□□ -0.69
MARK3-213ENST00000558611 KIF3AQ9Y496 699 aa10.75□□□□□ -0.69
MARK3-213ENST00000558611 PCDHGB3Q9Y5G1 929 aa10.75□□□□□ -0.69
MARK3-213ENST00000558611 ATG2AQ2TAZ0 1938 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 EYSQ5T1H1 3165 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 BAIAP3O94812 1187 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 IL18RAPO95256 599 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 ITGB2P05107 769 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 TECP42680 631 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 PRKCEQ02156 737 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 DAG1Q14118 895 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 MAN2A1Q16706 1144 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 UGCGQ16739 394 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 PLEKHN1Q494U1 663 aaPredicted RBP10.74□□□□□ -0.69
MARK3-213ENST00000558611 ZNF484Q5JVG2 852 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 CNKSR3Q6P9H4 555 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 ZC3H14Q6PJT7 736 aaKnown RBP10.74□□□□□ -0.69
MARK3-213ENST00000558611 MTHFD1LQ6UB35 978 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 RSPH3Q86UC2 560 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 FAM129CQ86XR2 697 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 ALG3Q92685 438 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 HAS1Q92839 578 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 ZBTB10Q96DT7 871 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 TMEM41AQ96HV5 264 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 MSLNLQ96KJ4 702 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 MYLK2Q9H1R3 596 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 CCDC39Q9UFE4 941 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 PCDHA3Q9Y5H8 950 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 SLC4A7Q9Y6M7 1214 aa10.74□□□□□ -0.69
MARK3-213ENST00000558611 SMIM35A0A1B0GVV1 85 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 NEMFO60524 1076 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 CHRNA1P02708 482 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 LTA4HP09960 611 aaKnown RBP10.73□□□□□ -0.69
MARK3-213ENST00000558611 GJB2P29033 226 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 MRPS6P82932 125 aaKnown RBP10.73□□□□□ -0.69
MARK3-213ENST00000558611 MGAT3Q09327 533 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 CALCRLQ16602 461 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 TCTN1Q2MV58 587 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 KHDC1Q4VXA5 237 aaKnown RBP10.73□□□□□ -0.69
MARK3-213ENST00000558611 MMS22LQ6ZRQ5 1243 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 PCGF5Q86SE9 256 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 RNF152Q8N8N0 203 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 DNAJB3Q8WWF6 145 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 TMEM209Q96SK2 561 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 FAM49AQ9H0Q0 323 aaPredicted RBP10.73□□□□□ -0.69
MARK3-213ENST00000558611 ARHGAP20Q9P2F6 1191 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.73□□□□□ -0.69
MARK3-213ENST00000558611 REV3LO60673 3130 aa10.73□□□□□ -0.69
MARK3-213ENST00000558611 GRXCR1A8MXD5 290 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 KIF28PB7ZC32 967 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 SLC26A4O43511 780 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 BAG4O95429 457 aaKnown RBP10.72□□□□□ -0.69
MARK3-213ENST00000558611 C22orf31O95567 290 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 U2AF2P26368 475 aaKnown RBP eCLIP10.72□□□□□ -0.69
MARK3-213ENST00000558611 KLRC1P26715 233 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 SLC7A1P30825 629 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 SLC6A9P48067 706 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 WDR5P61964 334 aaKnown RBP10.72□□□□□ -0.69
MARK3-213ENST00000558611 CD83Q01151 205 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 FMO1Q01740 532 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 TARDBPQ13148 414 aaKnown RBP eCLIP10.72□□□□□ -0.69
MARK3-213ENST00000558611 ORC2Q13416 577 aaPredicted RBP10.72□□□□□ -0.69
MARK3-213ENST00000558611 BLMHQ13867 455 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 HIBCHQ6NVY1 386 aaPredicted RBP10.72□□□□□ -0.69
MARK3-213ENST00000558611 PGBD2Q6P3X8 592 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 TMC5Q6UXY8 1006 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 Q7L0L9 218 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 TRMT1LQ7Z2T5 733 aaKnown RBP10.72□□□□□ -0.69
MARK3-213ENST00000558611 DEFB123Q8N688 67 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 FLCNQ8NFG4 579 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 CPA5Q8WXQ8 436 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 TRIM63Q969Q1 353 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 CYFIP2Q96F07 1278 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 KLHL14Q9P2G3 628 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 SMC3Q9UQE7 1217 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 COL4A6Q14031 1691 aa10.72□□□□□ -0.69
MARK3-213ENST00000558611 M0QZ92 97 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 FSBPO95073 299 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 STBD1O95210 358 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 LY86O95711 162 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 IL18BPO95998 194 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 FTH1P19P0C7X4 201 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 ECHS1P30084 290 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 MCM7P33993 719 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 MAPK10P53779 464 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 PSMC5P62195 406 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 CD69Q07108 199 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 CUL4AQ13619 759 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 RAB30Q15771 203 aa10.71□□□□□ -0.69
MARK3-213ENST00000558611 MST1LQ2TV78 715 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms