RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 MRPL44Q9H9J2 332 aaKnown RBP4.86□□□□□ -1.63
CCDC38-204ENST00000546816 GJB4Q9NTQ9 266 aa4.86□□□□□ -1.63
CCDC38-204ENST00000546816 PCDHB2Q9Y5E7 798 aa4.86□□□□□ -1.63
CCDC38-204ENST00000546816 SIRT4Q9Y6E7 314 aaPredicted RBP4.86□□□□□ -1.63
CCDC38-204ENST00000546816 PRYO14603 147 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 PQBP1O60828 265 aaKnown RBP4.85□□□□□ -1.63
CCDC38-204ENST00000546816 EPN2O95208 641 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 CD63P08962 238 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 PLA2G2AP14555 144 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 FGFR2P21802 821 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 RPS6KB1P23443 525 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 DUSP1P28562 367 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 CASP5P51878 434 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 GPS1Q13098 491 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 TTC17Q96AE7 1141 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 RXFP3Q9NSD7 469 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 TMEM45AQ9NWC5 275 aa4.85□□□□□ -1.63
CCDC38-204ENST00000546816 POM121BA6NF01 834 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 KPNA5O15131 536 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 COQ9O75208 318 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 NGFRP08138 427 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 SLC5A1P13866 664 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 ST6GAL1P15907 406 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 TSHRP16473 764 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 MST1P26927 711 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 HOXD12P35452 270 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 IL6STP40189 918 aaPredicted RBP4.84□□□□□ -1.63
CCDC38-204ENST00000546816 CNGA3Q16281 694 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 TMEM196Q5HYL7 178 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 RAP1GAP2Q684P5 730 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 RBM44Q6ZP01 1051 aaKnown RBP4.84□□□□□ -1.63
CCDC38-204ENST00000546816 FMNL3Q8IVF7 1028 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 CCDC28AQ8IWP9 274 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 ASB5Q8WWX0 329 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 PIGKQ92643 395 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 GDF15Q99988 308 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 TMEM204Q9BSN7 226 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 MDFICQ9P1T7 246 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 KLHL42Q9P2K6 505 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 MYO1AQ9UBC5 1043 aa4.84□□□□□ -1.63
CCDC38-204ENST00000546816 OR2W5A6NFC9 320 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 ERVV-2B6SEH9 535 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 CTIFO43310 598 aaKnown RBP4.83□□□□□ -1.64
CCDC38-204ENST00000546816 CCNT2O60583 730 aaKnown RBP4.83□□□□□ -1.64
CCDC38-204ENST00000546816 DRD1P21728 446 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 VPS41P49754 854 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 ZNF84P51523 738 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 PRTGQ2VWP7 1150 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 FAXCQ5TGI0 409 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 FAM57BQ71RH2 274 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 RFX6Q8HWS3 928 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 AKAP1Q92667 903 aaKnown RBP eCLIP4.83□□□□□ -1.64
CCDC38-204ENST00000546816 CELF1Q92879 486 aaKnown RBP4.83□□□□□ -1.64
CCDC38-204ENST00000546816 FAM84BQ96KN1 310 aaPredicted RBP4.83□□□□□ -1.64
CCDC38-204ENST00000546816 RNF26Q9BY78 433 aaPredicted RBP4.83□□□□□ -1.64
CCDC38-204ENST00000546816 MOV10Q9HCE1 1003 aaKnown RBP4.83□□□□□ -1.64
CCDC38-204ENST00000546816 TMOD4Q9NZQ9 345 aa4.83□□□□□ -1.64
CCDC38-204ENST00000546816 ZMYND8Q9ULU4 1186 aaPredicted RBP4.83□□□□□ -1.64
CCDC38-204ENST00000546816 A0A1W2PPC4 97 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 NDUFB8O95169 186 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 GABRB3P28472 473 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 SLC5A2P31639 672 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 IGHMBP2P38935 993 aaKnown RBP4.82□□□□□ -1.64
CCDC38-204ENST00000546816 SOX2P48431 317 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 PRIM2P49643 509 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 PGGT1BP53609 377 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 MTA1Q13330 715 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 BFSP2Q13515 415 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 INPP5JQ15735 1006 aaPredicted RBP4.82□□□□□ -1.64
CCDC38-204ENST00000546816 MRNIPQ6NTE8 343 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 TLDC1Q6P9B6 456 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 USP17L6PQ6QN14 398 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 KYAT3Q6YP21 454 aaKnown RBP4.82□□□□□ -1.64
CCDC38-204ENST00000546816 RFX8Q6ZV50 586 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 CLASRPQ8N2M8 674 aaKnown RBP4.82□□□□□ -1.64
CCDC38-204ENST00000546816 GJA10Q969M2 543 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 MAGEB5Q9BZ81 275 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 TXLNGQ9NUQ3 528 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 ASNSD1Q9NWL6 643 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 SELENONQ9NZV5 590 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 PCDHA12Q9UN75 941 aa4.82□□□□□ -1.64
CCDC38-204ENST00000546816 TRBV5-3A0A0A0MS03 114 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 M0QZQ0 153 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 ZSCAN9O15535 394 aaPredicted RBP4.81□□□□□ -1.64
CCDC38-204ENST00000546816 MYL4P12829 197 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 ALADP13716 330 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 HOXB2P14652 356 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 MATN1P21941 496 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 NDUFS1P28331 727 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 TNFRSF8P28908 595 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 ARRB2P32121 409 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 ALDH7A1P49419 539 aaKnown RBP4.81□□□□□ -1.64
CCDC38-204ENST00000546816 SLC12A2P55011 1212 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 SEMA3BQ13214 749 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 ATP1A4Q13733 1029 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 ELF2Q15723 593 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 ASIC2Q16515 512 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.81□□□□□ -1.64
CCDC38-204ENST00000546816 ACSM6Q6P461 480 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 PIK3AP1Q6ZUJ8 805 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms