RNA–Protein interactions for RNA: ENST00000540394.5

C1R-206, Transcript of complement C1r, humanhuman

TSL 2

Gene C1R, Length 3,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-206ENST00000540394 VSTM1Q6UX27 236 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 SPATA31D4Q6ZUB0 917 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 BBS12Q6ZW61 710 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 CCDC105Q8IYK2 499 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 KRT222Q8N1A0 295 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 SCML4Q8N228 414 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 TSEN2Q8NCE0 465 aaKnown RBP11.86□□□□□ -0.51
C1R-206ENST00000540394 SLC35B2Q8TB61 432 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 SPOCK3Q9BQ16 436 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 DNAI2Q9GZS0 605 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 SNX24Q9Y343 169 aa11.86□□□□□ -0.51
C1R-206ENST00000540394 TNFRSF8P28908 595 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 DEUP1Q05D60 604 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
C1R-206ENST00000540394 BRD3Q15059 726 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 CCNG2Q16589 344 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 CLP1Q92989 425 aaKnown RBP11.85□□□□□ -0.51
C1R-206ENST00000540394 PGAP3Q96FM1 320 aaPredicted RBP11.85□□□□□ -0.51
C1R-206ENST00000540394 CSPG4P5Q96PW8 444 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 ERP44Q9BS26 406 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 ALG13Q9NP73 1137 aaKnown RBP11.85□□□□□ -0.51
C1R-206ENST00000540394 BLOC1S6Q9UL45 172 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 CAPN9O14815 690 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 FGF18O76093 207 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 TJP3O95049 919 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 KLRC2P26717 231 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 TUBB4BP68371 445 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 IRX1P78414 480 aaPredicted RBP11.85□□□□□ -0.51
C1R-206ENST00000540394 GBE1Q04446 702 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 BOLA3Q53S33 107 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 IRGQQ8WZA9 623 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 SLCO2A1Q92959 643 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 TMEM169Q96HH4 297 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 PWWP2AQ96N64 755 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 LRRC4CQ9HCJ2 640 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.85□□□□□ -0.51
C1R-206ENST00000540394 SUN2Q9UH99 717 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 SCML2Q9UQR0 700 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 PDE4DIPQ5VU43 2346 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 TPP2P29144 1249 aaPredicted RBP11.85□□□□□ -0.51
C1R-206ENST00000540394 FNTAP49354 379 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 TAF10Q12962 218 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 SEMA3BQ13214 749 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 PPIGQ13427 754 aaKnown RBP eCLIP11.85□□□□□ -0.51
C1R-206ENST00000540394 SLC9A4Q6AI14 798 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 C1orf228Q6PIY5 440 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 MAMSTRQ6ZN01 415 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 DDX53Q86TM3 631 aaKnown RBP11.85□□□□□ -0.51
C1R-206ENST00000540394 RFX6Q8HWS3 928 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 HERC6Q8IVU3 1022 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 PLVAPQ9BX97 442 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.85□□□□□ -0.51
C1R-206ENST00000540394 MTUS1Q9ULD2 1270 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 BACE2Q9Y5Z0 518 aa11.85□□□□□ -0.51
C1R-206ENST00000540394 USP34Q70CQ2 3546 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 AMPD1P23109 780 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 GLUD2P49448 558 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 VPS41P49754 854 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 BYSLQ13895 437 aaKnown RBP11.84□□□□□ -0.51
C1R-206ENST00000540394 NCBP2-AS2Q69YL0 99 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 DENND5BQ6ZUT9 1274 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 CCDC26Q8TAB7 109 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 SPG21Q9NZD8 308 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 FBXW11Q9UKB1 542 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 TEX28O15482 410 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 HMGA1P17096 107 aaKnown RBP11.84□□□□□ -0.51
C1R-206ENST00000540394 LAG3P18627 525 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 ADRA1BP35368 520 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 CXCR3P49682 368 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 ERVFC1P60507 584 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 DHX34Q14147 1143 aaKnown RBP11.84□□□□□ -0.51
C1R-206ENST00000540394 UNC45BQ8IWX7 931 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 ZNF461Q8TAF7 563 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 FBXO25Q8TCJ0 367 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 SPPL2BQ8TCT7 592 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 HERC2P3Q9BVR0 1158 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 TKTL2Q9H0I9 626 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 ZBP1Q9H171 429 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 CCSER2Q9H7U1 834 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 COL6A3P12111 3177 aa11.84□□□□□ -0.51
C1R-206ENST00000540394 CAMK1Q14012 370 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 KRT81Q14533 505 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 MAATS1Q7Z4T9 603 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 ZC3H18Q86VM9 953 aaKnown RBP11.83□□□□□ -0.51
C1R-206ENST00000540394 TRIM42Q8IWZ5 723 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.51
C1R-206ENST00000540394 HERVK_113Q902F9 699 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 CCDC114Q96M63 670 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 C17orf80Q9BSJ5 609 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 ADAM7Q9H2U9 754 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 FAM204AQ9H8W3 233 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.51
C1R-206ENST00000540394 STAP1Q9ULZ2 295 aa11.83□□□□□ -0.51
C1R-206ENST00000540394 HIDE1A8MVS5 230 aa11.83□□□□□ -0.52
C1R-206ENST00000540394 H7C4K7 107 aa11.83□□□□□ -0.52
C1R-206ENST00000540394 IRAK2O43187 625 aa11.83□□□□□ -0.52
C1R-206ENST00000540394 EFCAB14O75071 495 aa11.83□□□□□ -0.52
C1R-206ENST00000540394 ATF2P15336 505 aa11.83□□□□□ -0.52
C1R-206ENST00000540394 KIAA1841Q6NSI8 718 aa11.83□□□□□ -0.52
C1R-206ENST00000540394 NPWQ8N729 165 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms