RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 LAD1O00515 517 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 SCO2O43819 266 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC37A4O43826 429 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 NUAK1O60285 661 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 CKMT2P17540 419 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ARNTP27540 789 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 NUDT2P50583 147 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ARSEP51690 589 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 TXNL4AP83876 142 aaKnown RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 Q3C1V9 767 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 MSS51Q4VC12 460 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ZCCHC8Q6NZY4 707 aaKnown RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 DCP2Q8IU60 420 aaKnown RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 TP53I13Q8NBR0 393 aaPredicted RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 NEDD1Q8NHV4 660 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ZC3H15Q8WU90 426 aaKnown RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ATP6V1E2Q96A05 226 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ZFYVE19Q96K21 471 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 CDRT15Q96T59 188 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 B3GNT3Q9Y2A9 372 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 TNRQ92752 1358 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ASNA1O43681 348 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ACSL4O60488 711 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 SPAG6O75602 509 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 TOM1L1O75674 476 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 KLHL2O95198 593 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 NADKO95544 446 aaPredicted RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 TDP2O95551 362 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 CALM1P0DP23 149 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 CALM2P0DP24 149 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 CALM3P0DP25 149 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 PRKAA2P54646 552 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ARPP19P56211 112 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 IKBKEQ14164 716 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ATG16L1Q676U5 607 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 LLGL2Q6P1M3 1020 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ADGRA1Q86SQ6 560 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 NUDCD3Q8IVD9 361 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 DCAKDQ8WVC6 231 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 LRTOMTQ8WZ04 291 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 APOPT1Q96IL0 206 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 PCDHB18PQ96TA0 734 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 TBCBQ99426 244 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 CLSTN3Q9BQT9 956 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 TDRD1Q9BXT4 1180 aaKnown RBP12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 TRPV6Q9H1D0 765 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 KCNN3Q9UGI6 736 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 SERPINB13Q9UIV8 391 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC30A1Q9Y6M5 507 aa12.88□□□□□ -0.35
SLC28A1-203ENST00000394573 ZNF839A8K0R7 811 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 COPEO14579 308 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 SNAP91O60641 907 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 DBTP11182 482 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 NAGAP17050 411 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 DCKP27707 260 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 NMT1P30419 496 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 HSPA1LP34931 641 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 PTPN9P43378 593 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 HK2P52789 917 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 PRKCEQ02156 737 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 CALCRLQ16602 461 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 KRT79Q5XKE5 535 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 SDE2Q6IQ49 451 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 KCTD8Q6ZWB6 473 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC51BQ86UW2 128 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 ASCC1Q8N9N2 400 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 ABHD11Q8NFV4 315 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 ACMSDQ8TDX5 336 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 MAGED4Q96JG8 741 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 KCNK16Q96T55 309 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 C1orf50Q9BV19 199 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 DDX28Q9NUL7 540 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 CLDN25C9JDP6 229 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 ERVH48-1M5A8F1 160 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 DDAH1O94760 285 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 CTRB1P17538 263 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 SERPINB1P30740 379 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 NAMPTP43490 491 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 MRPS15P82914 257 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 NIPAL4Q0D2K0 466 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 STX3Q13277 289 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 TBCCQ15814 346 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC35G1Q2M3R5 365 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 MTX3Q5HYI7 312 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 CTRB2Q6GPI1 263 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 ADGRD1Q6QNK2 874 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 GPBP1Q86WP2 473 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 RELL1Q8IUW5 271 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 TMEM102Q8N9M5 508 aaPredicted RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 OR2T3Q8NH03 318 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 GLMNQ92990 594 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms