RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 MelkQ61846 643 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 RadilQ69Z89 1099 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 CapslQ6P8Y1 208 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Olfr670Q7TRP3 312 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 NapepldQ8BH82 396 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rmdn2Q8BSE0 410 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 ZwilchQ8R060 589 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Olfr474Q8VFC9 310 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ptdss1Q99LH2 473 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gimap3Q99MI6 301 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pkp2Q9CQ73 795 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam111aQ9D2L9 613 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 B3galt4Q9Z0F0 371 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ccnb1ip1D3Z3K2 276 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm6408J3QNG1 320 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Olfr611K7N609 323 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Olfr612L7N462 323 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fgfr1P16092 822 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gna13P27601 377 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rps6P62754 249 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam172aQ3TNH5 417 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nat8lQ3UGX3 299 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 9930111J21Rik1Q5SVP0 844 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Xlr3bQ6P205 226 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cyp2d12Q8BVD2 504 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Trappc12Q8K2L8 797 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pdk3Q922H2 415 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Taldo1Q93092 337 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 ToporslQ9D2F8 683 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ptges3Q9R0Q7 160 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cd97Q9Z0M6 818 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Vmn2r25W4VSP2 855 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Abca8bQ8K440 1620 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Neurl4Q5NCX5 1563 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Xlr5bA2BI50 236 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm4450E9Q007 373 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm5799E9Q2M1 201 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Atf6F6VAN0 656 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sgo2bJ3QMK1 1167 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pdk4O70571 412 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slc2a3P32037 493 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Vps26aP40336 327 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Aldh3a1P47739 453 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rfx2P48379 717 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rin3P59729 980 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pcbp1P60335 356 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 CkbQ04447 381 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ak8Q32M07 479 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Bbs1Q3V3N7 593 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Hsd3b4Q61767 373 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mis18bp1Q80WQ8 998 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ubp1Q811S7 540 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Atl1Q8BH66 558 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Acsm2Q8K0L3 575 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Idh3bQ91VA7 384 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fbxo32Q9CPU7 355 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tmed5Q9CXE7 229 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slc12a4Q9JIS8 1085 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Itgb6Q9Z0T9 787 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pld1Q9Z280 1074 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 4930407I10RikD3Z5T8 1512 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Znf541Q0GGX2 1363 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tecpr2Q3UH45 1423 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm10477F6SW83 55 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Olfr292F8VQ84 308 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Angpt1O08538 498 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 OsmrO70458 971 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rpusd2Q149F1 553 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mars2Q499X9 586 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Traf3Q60803 567 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mical2Q8BML1 960 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Arhgap12Q8C0D4 838 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tmcc3Q8R310 477 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Slc30a5Q8R4H9 761 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Wdr98Q8VC42 657 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ndfip2Q91ZP6 311 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Prl7c1Q9CRB5 251 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Dis3Q9CSH3 958 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam227bQ9D518 532 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tbx18Q9EPZ6 613 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 RhouQ9EQT3 261 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ybx3Q9JKB3 361 aaKnown RBP9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Atp6v1g2Q9WTT4 118 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 P2rx7Q9Z1M0 595 aa9.38□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cyp4a12bA2A974 508 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 MipepA6H611 711 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lipo2D3YY49 398 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Vmn2r55G3UWZ4 781 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Vmn2r53L7N473 806 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 FaahO08914 579 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Men1O88559 611 aaKnown RBP9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pth1rP41593 591 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ccr1P51675 355 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ndufs6P52503 116 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Polr2lP62876 67 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rmdn3Q3UJU9 470 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Q5EBG8 199 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tp53i13Q5F267 385 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lcp1Q61233 627 aaKnown RBP9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Usp49Q6P9L4 685 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms