RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ARHGAP25P42331 645 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 GHRHRQ02643 423 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 CFHR3Q02985 330 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 STK3Q13188 491 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 KCNB1Q14721 858 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 PLAG1Q6DJT9 500 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 SLC2A7Q6PXP3 512 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 GET4Q7L5D6 327 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 KCTD20Q7Z5Y7 419 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 MRPL10Q7Z7H8 261 aaKnown RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 SKAP1Q86WV1 359 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 ZNF354CQ86Y25 554 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 ANKRD42Q8N9B4 389 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 MAFAQ8NHW3 353 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 MBD3L2Q8NHZ7 208 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 TTC8Q8TAM2 541 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 SECISBP2LQ93073 1101 aaKnown RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 WDYHV1Q96HA8 205 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 SNX22Q96L94 193 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 HS6ST2Q96MM7 605 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 NEUROD6Q96NK8 337 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 HIST1H2AAQ96QV6 131 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 SH2D3AQ9BRG2 576 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 EFHD1Q9BUP0 239 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 SELENOOQ9BVL4 669 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 CINPQ9BW66 212 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 VPS16Q9H269 839 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 PNPLA8Q9NP80 782 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 HEYLQ9NQ87 328 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 KLHL13Q9P2N7 655 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 MGAT4CQ9UBM8 478 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 ASAP1Q9ULH1 1129 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 COL15A1P39059 1388 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 DYTNA2CJ06 578 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 MYMKA6NI61 221 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 CLGNO14967 610 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 THAP12O43422 761 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 DHX16O60231 1041 aaKnown RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 USP12O75317 370 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 IL18RAPO95256 599 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 FGBP02675 491 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 MCM5P33992 734 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 DDIT3P35638 169 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 DGKQP52824 942 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 COPB1P53618 953 aaKnown RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 COPAP53621 1224 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 ITGA8P53708 1063 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 GEMIN4P57678 1058 aaKnown RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 EIF4A1P60842 406 aaKnown RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 HSF1Q00613 529 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 BIRC3Q13489 604 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 DAG1Q14118 895 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 TWIST1Q15672 202 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 SLC4A8Q2Y0W8 1093 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 FAM133BQ5BKY9 247 aaKnown RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 CYB5RLQ6IPT4 315 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 USP17L6PQ6QN14 398 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 DEF8Q6ZN54 512 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 USP49Q70CQ1 688 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 UNC13DQ70J99 1090 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 KRT28Q7Z3Y7 464 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 C14orf80Q86SX3 495 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 DGKHQ86XP1 1220 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 C12orf76Q8N812 135 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 PPHLN1Q8NEY8 458 aaKnown RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 OSR1Q8TAX0 266 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 PHKBQ93100 1093 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 TRIM63Q969Q1 353 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 COQ8BQ96D53 544 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 IQCDQ96DY2 449 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 ZBTB45Q96K62 511 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 FAM227BQ96M60 508 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 TTC14Q96N46 770 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 SPRTNQ9H040 489 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 DDX21Q9NR30 783 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 POLG2Q9UHN1 485 aa3.01□□□□□ -1.93
HMGB1P24-202ENST00000615653 NOTCH2Q04721 2471 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 SPATA31A1Q5TZJ5 1347 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 FAM170AA1A519 330 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 TTC36A6NLP5 189 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 CLCA1A8K7I4 914 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 PRSS44E7EML9 344 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 SOCS2O14508 198 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 FCHO1O14526 889 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 FIBPO43427 364 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 WDR47O94967 919 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 TMEM191BP0C7N4 346 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 SLC5A2P31639 672 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 TERF1P54274 439 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 HTRA4P83105 476 aaPredicted RBP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 SRSF1Q07955 248 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 GALEQ14376 348 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 PUM3Q15397 648 aaKnown RBP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 CDC37Q16543 378 aaPredicted RBP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 Q4G0T1 1027 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 CCDC92Q53HC0 331 aaPredicted RBP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 TMTC4Q5T4D3 741 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 MANEALQ5VSG8 457 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 RNF44Q7L0R7 432 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms