RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
HMGB1P24-202ENST00000615653 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
HMGB1P24-202ENST00000615653 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
HMGB1P24-202ENST00000615653 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
HMGB1P24-202ENST00000615653 FOXD1Q16676 465 aa18.63■□□□□ 0.57
HMGB1P24-202ENST00000615653 POTEDQ86YR6 584 aa18.38■□□□□ 0.53
HMGB1P24-202ENST00000615653 MSH5O43196 834 aa17.69■□□□□ 0.42
HMGB1P24-202ENST00000615653 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
HMGB1P24-202ENST00000615653 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
HMGB1P24-202ENST00000615653 ADRA2BP18089 450 aa16.8■□□□□ 0.28
HMGB1P24-202ENST00000615653 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
HMGB1P24-202ENST00000615653 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
HMGB1P24-202ENST00000615653 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
HMGB1P24-202ENST00000615653 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
HMGB1P24-202ENST00000615653 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
HMGB1P24-202ENST00000615653 RNF39Q9H2S5 420 aa15.04■□□□□ -0
HMGB1P24-202ENST00000615653 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
HMGB1P24-202ENST00000615653 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
HMGB1P24-202ENST00000615653 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
HMGB1P24-202ENST00000615653 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
HMGB1P24-202ENST00000615653 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
HMGB1P24-202ENST00000615653 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
HMGB1P24-202ENST00000615653 DNAJC5BQ9UF47 199 aa14.53□□□□□ -0.08
HMGB1P24-202ENST00000615653 POTEHQ6S545 545 aa14.27□□□□□ -0.13
HMGB1P24-202ENST00000615653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
HMGB1P24-202ENST00000615653 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
HMGB1P24-202ENST00000615653 DSG3P32926 999 aa13.86□□□□□ -0.19
HMGB1P24-202ENST00000615653 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
HMGB1P24-202ENST00000615653 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
HMGB1P24-202ENST00000615653 CAPN15O75808 1086 aa13.74□□□□□ -0.21
HMGB1P24-202ENST00000615653 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
HMGB1P24-202ENST00000615653 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
HMGB1P24-202ENST00000615653 ABCB7O75027 752 aa13.35□□□□□ -0.27
HMGB1P24-202ENST00000615653 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
HMGB1P24-202ENST00000615653 APLP2Q06481 763 aa13.31□□□□□ -0.28
HMGB1P24-202ENST00000615653 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
HMGB1P24-202ENST00000615653 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
HMGB1P24-202ENST00000615653 CHRDL2Q6WN34 429 aa13.2□□□□□ -0.3
HMGB1P24-202ENST00000615653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
HMGB1P24-202ENST00000615653 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
HMGB1P24-202ENST00000615653 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
HMGB1P24-202ENST00000615653 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
HMGB1P24-202ENST00000615653 POLA2Q14181 598 aa12.87□□□□□ -0.35
HMGB1P24-202ENST00000615653 KCNA4P22459 653 aa12.82□□□□□ -0.36
HMGB1P24-202ENST00000615653 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
HMGB1P24-202ENST00000615653 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
HMGB1P24-202ENST00000615653 HAX1O00165 279 aa12.67□□□□□ -0.38
HMGB1P24-202ENST00000615653 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
HMGB1P24-202ENST00000615653 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
HMGB1P24-202ENST00000615653 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGB1P24-202ENST00000615653 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P24-202ENST00000615653 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
HMGB1P24-202ENST00000615653 EVX2Q03828 476 aa12.49□□□□□ -0.41
HMGB1P24-202ENST00000615653 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
HMGB1P24-202ENST00000615653 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
HMGB1P24-202ENST00000615653 LHX8Q68G74 356 aa12.24□□□□□ -0.45
HMGB1P24-202ENST00000615653 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
HMGB1P24-202ENST00000615653 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
HMGB1P24-202ENST00000615653 GABBR2O75899 941 aa12.18□□□□□ -0.46
HMGB1P24-202ENST00000615653 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
HMGB1P24-202ENST00000615653 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
HMGB1P24-202ENST00000615653 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
HMGB1P24-202ENST00000615653 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
HMGB1P24-202ENST00000615653 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
HMGB1P24-202ENST00000615653 CLEC11AQ9Y240 323 aa12.05□□□□□ -0.48
HMGB1P24-202ENST00000615653 FBLN2P98095 1184 aa11.96□□□□□ -0.49
HMGB1P24-202ENST00000615653 SLC4A1APQ9BWU0 796 aaKnown RBP11.96□□□□□ -0.49
HMGB1P24-202ENST00000615653 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.49
HMGB1P24-202ENST00000615653 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
HMGB1P24-202ENST00000615653 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
HMGB1P24-202ENST00000615653 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
HMGB1P24-202ENST00000615653 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
HMGB1P24-202ENST00000615653 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
HMGB1P24-202ENST00000615653 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
HMGB1P24-202ENST00000615653 CLCN6P51797 869 aa11.8□□□□□ -0.52
HMGB1P24-202ENST00000615653 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
HMGB1P24-202ENST00000615653 ZBTB22O15209 634 aa11.77□□□□□ -0.53
HMGB1P24-202ENST00000615653 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
HMGB1P24-202ENST00000615653 FARP1Q9Y4F1 1045 aaPredicted RBP11.69□□□□□ -0.54
HMGB1P24-202ENST00000615653 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
HMGB1P24-202ENST00000615653 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
HMGB1P24-202ENST00000615653 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
HMGB1P24-202ENST00000615653 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
HMGB1P24-202ENST00000615653 POTEMA6NI47 508 aa11.55□□□□□ -0.56
HMGB1P24-202ENST00000615653 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
HMGB1P24-202ENST00000615653 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
HMGB1P24-202ENST00000615653 ZRANB1Q9UGI0 708 aa11.5□□□□□ -0.57
HMGB1P24-202ENST00000615653 GALR2O43603 387 aaPredicted RBP11.47□□□□□ -0.57
HMGB1P24-202ENST00000615653 PCDH10Q9P2E7 1040 aa11.45□□□□□ -0.58
HMGB1P24-202ENST00000615653 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
HMGB1P24-202ENST00000615653 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
HMGB1P24-202ENST00000615653 PHF12Q96QT6 1004 aa11.27□□□□□ -0.61
HMGB1P24-202ENST00000615653 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
HMGB1P24-202ENST00000615653 LCE2DQ5TA82 110 aaPredicted RBP11.24□□□□□ -0.61
HMGB1P24-202ENST00000615653 STAG3Q9UJ98 1225 aa11.24□□□□□ -0.61
HMGB1P24-202ENST00000615653 POTEJP0CG39 1038 aa11.23□□□□□ -0.61
HMGB1P24-202ENST00000615653 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
HMGB1P24-202ENST00000615653 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
HMGB1P24-202ENST00000615653 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
HMGB1P24-202ENST00000615653 C7P10643 843 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms