RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 HERC3Q15034 1050 aa14.12□□□□□ -0.15
CHD1-212ENST00000614616 UGT3A1Q6NUS8 523 aa14.12□□□□□ -0.15
CHD1-212ENST00000614616 RNF145Q96MT1 663 aa14.12□□□□□ -0.15
CHD1-212ENST00000614616 PLEKHA5Q9HAU0 1116 aa14.12□□□□□ -0.15
CHD1-212ENST00000614616 PCDH9Q9HC56 1237 aa14.12□□□□□ -0.15
CHD1-212ENST00000614616 NDUFAF1Q9Y375 327 aa14.12□□□□□ -0.15
CHD1-212ENST00000614616 PGK2P07205 417 aa14.12□□□□□ -0.15
CHD1-212ENST00000614616 ATF6P18850 670 aa14.12□□□□□ -0.15
CHD1-212ENST00000614616 ZNF605Q86T29 641 aa14.12□□□□□ -0.15
CHD1-212ENST00000614616 MARCH10Q8NA82 808 aaPredicted RBP14.12□□□□□ -0.15
CHD1-212ENST00000614616 USP32Q8NFA0 1604 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 SIN3BO75182 1162 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 STOX1Q6ZVD7 989 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 PQLC1Q8N2U9 271 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 CENPIQ92674 756 aaPredicted RBP14.11□□□□□ -0.15
CHD1-212ENST00000614616 BTBD9Q96Q07 612 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 GTF3C4Q9UKN8 822 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 TDRKHQ9Y2W6 561 aaKnown RBP14.11□□□□□ -0.15
CHD1-212ENST00000614616 RAD54BQ9Y620 910 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 KIAA0391O15091 583 aaKnown RBP14.11□□□□□ -0.15
CHD1-212ENST00000614616 PLOD3O60568 738 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 GTF2H3Q13889 308 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 PDXDC2PQ6P474 469 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 RGSL1A5PLK6 1076 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 HAT1O14929 419 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 TCF4P15884 667 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 MAPKAPK2P49137 400 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 SLC9A4Q6AI14 798 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 POLG2Q9UHN1 485 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 DUSP12Q9UNI6 340 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 RPS6KL1Q9Y6S9 549 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 SOAT2O75908 522 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 EPN2O95208 641 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 ATG4AQ8WYN0 398 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 ROGDIQ9GZN7 287 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.11□□□□□ -0.153e-11■■■■□ 20.1
CHD1-212ENST00000614616 CDK8P49336 464 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 ARPP19P56211 112 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 ITFG1Q8TB96 612 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 LXNQ9BS40 222 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHD1-212ENST00000614616 AP3M1Q9Y2T2 418 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 SLC16A4O15374 487 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 MSLNQ13421 630 aaPredicted RBP14.11□□□□□ -0.15
CHD1-212ENST00000614616 SH3D19Q5HYK7 790 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 NECAB2Q7Z6G3 386 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 KAT2BQ92831 832 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 SP140LQ9H930 580 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 FKBP14Q9NWM8 211 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 COMMD9Q9P000 198 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 VPS9D1Q9Y2B5 631 aa14.11□□□□□ -0.15
CHD1-212ENST00000614616 CLDN25C9JDP6 229 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 TRDMT1O14717 391 aaKnown RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 HOXA13P31271 388 aaPredicted RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 TUFMP49411 452 aaKnown RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 UBXN2AP68543 259 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 PRR23CQ6ZRP0 262 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 STRA8Q7Z7C7 330 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 MRPL4Q9BYD3 311 aaKnown RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 TMCC2O75069 709 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 NAMPTP43490 491 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 MTMR1Q13613 665 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 PROSER3Q2NL68 480 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 GRTP1Q5TC63 336 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 IGDCC4Q8TDY8 1250 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 HPS4Q9NQG7 708 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 RNF112Q9ULX5 631 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 PKP3Q9Y446 797 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 GZMAP12544 262 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 PRIM2P49643 509 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 ISLR2Q6UXK2 745 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 MCFD2Q8NI22 146 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 ANAPC2Q9UJX6 822 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 MYO3AQ8NEV4 1616 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 DNM1LO00429 736 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 USP17L8P0C7I0 530 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 MSH3P20585 1137 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 RAD51Q06609 339 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 ST3GAL1Q11201 340 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 AKIRIN2Q53H80 203 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 TTC23Q5W5X9 447 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 KCTD17Q8N5Z5 321 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 MMTAG2Q9BU76 263 aaKnown RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 NCKAP5LQ9HCH0 1330 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 ZNF197O14709 1029 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 KCNQ3O43525 872 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 STX4Q12846 297 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 KYAT1Q16773 422 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 CYP2R1Q6VVX0 501 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 DPP10Q8N608 796 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 SRPK1Q96SB4 655 aaKnown RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 ZFYVE28Q9HCC9 887 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 PCYOX1Q9UHG3 505 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 LOXHD1Q8IVV2 1947 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 SYNDIG1LA6NDD5 238 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 NADKO95544 446 aaPredicted RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 AVPR1AP37288 418 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 RGS4P49798 205 aa14.1□□□□□ -0.15
CHD1-212ENST00000614616 SNRNP35Q16560 246 aaKnown RBP14.1□□□□□ -0.15
CHD1-212ENST00000614616 GALNT18Q6P9A2 607 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms