RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	PCDHB2	Q9Y5E7	798 aa		4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.87	□□□□□ -1.63
RAP1B-231	ENST00000544639	CCDC187	A0A096LP49	1063 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	LOC105369274	A0A096LPK9	316 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	LOC102723532	A0A0G2JNH3	316 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	TCRBV5S1A1T	A0A578	114 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	PLEKHD1	A6NEE1	506 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	LRRC3C	A6NJW4	275 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	ALAD	P13716	330 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	MMP8	P22894	467 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	GALNS	P34059	522 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	ELL	P55199	621 aa	Predicted RBP	4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	AP2B1	P63010	937 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	FAM187B	Q17R55	369 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	BTBD16	Q32M84	506 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	INO80D	Q53TQ3	878 aa	Predicted RBP	4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	TMEM63B	Q5T3F8	832 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	GORAB	Q5T7V8	394 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	SUMO4	Q6EEV6	95 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	FBXO42	Q6P3S6	717 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	KLHL17	Q6TDP4	642 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	KRT27	Q7Z3Y8	459 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	PRIMA1	Q86XR5	153 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	OR4N4	Q8N0Y3	316 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	ANKRD42	Q8N9B4	389 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	FAM71D	Q8N9W8	422 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	SPATA5	Q8NB90	893 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	ZG16B	Q96DA0	208 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	MCRS1	Q96EZ8	462 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	PABPC3	Q9H361	631 aa	Known RBP	4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	MLXIP	Q9HAP2	919 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	ABHD10	Q9NUJ1	306 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	FBXO28	Q9NVF7	368 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	NFU1	Q9UMS0	254 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	CNTN6	Q9UQ52	1028 aa		4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.86	□□□□□ -1.63
RAP1B-231	ENST00000544639	KIF28P	B7ZC32	967 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639		H3BNC9	293 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	IPO5	O00410	1097 aa	Known RBP	4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	ATF7	P17544	494 aa	Predicted RBP	4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	MATN1	P21941	496 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	IGHMBP2	P38935	993 aa	Known RBP	4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	JAK3	P52333	1124 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	PROK1	P58294	105 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	LARS2	Q15031	903 aa	Known RBP	4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	FCRLB	Q6BAA4	426 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	ACSM6	Q6P461	480 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	C16orf89	Q6UX73	402 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	DCDC5	Q6ZRR9	648 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	OR52L2P	Q8NGH6	319 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	SCAMP5	Q8TAC9	235 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	NPIPB3	Q92617	1050 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	FYTTD1	Q96QD9	318 aa	Known RBP	4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	DDX23	Q9BUQ8	820 aa	Known RBP	4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	CDCP1	Q9H5V8	836 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	MYH16	Q9H6N6	1097 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	SEMA5B	Q9P283	1151 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	PCDHB7	Q9Y5E2	793 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	AOX1	Q06278	1338 aa		4.85	□□□□□ -1.63
RAP1B-231	ENST00000544639	BTBD19	C9JJ37	291 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	POC1B-GALNT4	F8VUJ3	575 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	SMIM22	K7EJ46	135 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	FYB1	O15117	783 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	PPP6R2	O75170	966 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	GCAT	O75600	419 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	NHLRC4	P0CG21	123 aa	Predicted RBP	4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	DUSP1	P28562	367 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	THBS4	P35443	961 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	PRKG1	Q13976	671 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	KCNB1	Q14721	858 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	MFSD13A	Q14CX5	517 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	POSTN	Q15063	836 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	PROSER3	Q2NL68	480 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	C4orf46	Q504U0	113 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	TTC22	Q5TAA0	569 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	NFRKB	Q6P4R8	1299 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	TMEM65	Q6PI78	240 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	SERPINA13P	Q6UXR4	307 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	RAB11FIP2	Q7L804	512 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	RD3	Q7Z3Z2	195 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	ADGRG3	Q86Y34	549 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	GALNT4	Q8N4A0	578 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	GLMP	Q8WWB7	406 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	RITA1	Q96K30	269 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	HS6ST2	Q96MM7	605 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	CRAMP1	Q96RY5	1269 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	PAGR1	Q9BTK6	254 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	ISCA1	Q9BUE6	129 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	RNF26	Q9BY78	433 aa	Predicted RBP	4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	VPS16	Q9H269	839 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	SRP68	Q9UHB9	627 aa	Known RBP	4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	DAPP1	Q9UN19	280 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	VPS4A	Q9UN37	437 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	ZBTB1	Q9Y2K1	713 aa		4.84	□□□□□ -1.63
RAP1B-231	ENST00000544639	SPATA31A1	Q5TZJ5	1347 aa		4.83	□□□□□ -1.64

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