RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 UGDHO60701 494 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 ATG13O75143 517 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 ZC3H11AO75152 810 aaKnown RBP eCLIP4.84□□□□□ -1.63
SRRM1-219ENST00000495561 TBXAS1P24557 533 aaPredicted RBP4.84□□□□□ -1.63
SRRM1-219ENST00000495561 RAB27AP51159 221 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 PTGR1Q14914 329 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 PTPROQ16827 1216 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 KRTAP27-1Q3LI81 207 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 NUGGCQ68CJ6 796 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 ZNF324BQ6AW86 544 aaPredicted RBP4.84□□□□□ -1.63
SRRM1-219ENST00000495561 MZT2AQ6P582 158 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 FSTL5Q8N475 847 aaPredicted RBP4.84□□□□□ -1.63
SRRM1-219ENST00000495561 RUNDC1Q96C34 613 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 FAM84BQ96KN1 310 aaPredicted RBP4.84□□□□□ -1.63
SRRM1-219ENST00000495561 BRINP2Q9C0B6 783 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 TXLNGQ9NUQ3 528 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 DDX56Q9NY93 547 aaKnown RBP4.84□□□□□ -1.63
SRRM1-219ENST00000495561 MDFICQ9P1T7 246 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 AGO2Q9UKV8 859 aaKnown RBP4.84□□□□□ -1.63
SRRM1-219ENST00000495561 TPCN1Q9ULQ1 816 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 L1RE1Q9UN81 338 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 HPSEQ9Y251 543 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 ERCC6Q03468 1493 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 WDR47O94967 919 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 INMTO95050 263 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 TFEBP19484 476 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 YY1P25490 414 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 VPS41P49754 854 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 FMO1Q01740 532 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 FHL3Q13643 280 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 CNGA3Q16281 694 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 ADGRF4Q8IZF3 695 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 MIB2Q96AX9 1013 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 CDH19Q9H159 772 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 ABHD10Q9NUJ1 306 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 ITGB1BP2Q9UKP3 347 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 CAPN11Q9UMQ6 739 aa4.83□□□□□ -1.64
SRRM1-219ENST00000495561 BAZ1BQ9UIG0 1483 aaKnown RBP4.82□□□□□ -1.64
SRRM1-219ENST00000495561 PRPF3O43395 683 aaKnown RBP4.82□□□□□ -1.64
SRRM1-219ENST00000495561 RFPL1O75677 317 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 AASDHQ4L235 1098 aaPredicted RBP4.82□□□□□ -1.64
SRRM1-219ENST00000495561 CAPRIN2Q6IMN6 1127 aaKnown RBP4.82□□□□□ -1.64
SRRM1-219ENST00000495561 UNC13DQ70J99 1090 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 RFX6Q8HWS3 928 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 UEVLDQ8IX04 471 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 FBXL14Q8N1E6 418 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 MBD3L2Q8NHZ7 208 aaPredicted RBP4.82□□□□□ -1.64
SRRM1-219ENST00000495561 GPATCH3Q96I76 525 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 THSD1Q9NS62 852 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 ASNSD1Q9NWL6 643 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 ANAPC4Q9UJX5 808 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 SMARCA2P51531 1590 aa4.82□□□□□ -1.64
SRRM1-219ENST00000495561 IFITM10A6NMD0 228 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 PRYO14603 147 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 PRPF4O43172 522 aaKnown RBP eCLIP4.81□□□□□ -1.643e-6■■■□□ 16.6
SRRM1-219ENST00000495561 SOX2P48431 317 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 CARSP49589 748 aaKnown RBP4.81□□□□□ -1.64
SRRM1-219ENST00000495561 GAB1Q13480 694 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 ACOX1Q15067 660 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 TTLL5Q6EMB2 1281 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 SESTD1Q86VW0 696 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 CELF1Q92879 486 aaKnown RBP4.81□□□□□ -1.64
SRRM1-219ENST00000495561 NTPCRQ9BSD7 190 aaKnown RBP4.81□□□□□ -1.64
SRRM1-219ENST00000495561 RNF26Q9BY78 433 aaPredicted RBP4.81□□□□□ -1.64
SRRM1-219ENST00000495561 RBM38Q9H0Z9 239 aaKnown RBP4.81□□□□□ -1.64
SRRM1-219ENST00000495561 TYW1Q9NV66 732 aaKnown RBP4.81□□□□□ -1.64
SRRM1-219ENST00000495561 VPS4AQ9UN37 437 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 PCDHA7Q9UN72 937 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 PCDHB2Q9Y5E7 798 aa4.81□□□□□ -1.64
SRRM1-219ENST00000495561 BAZ1AQ9NRL2 1556 aaPredicted RBP4.81□□□□□ -1.64
SRRM1-219ENST00000495561 HOXA11P31270 313 aaPredicted RBP4.8□□□□□ -1.64
SRRM1-219ENST00000495561 SMTNL2Q2TAL5 461 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 PDXDC1Q6P996 788 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 TRAPPC11Q7Z392 1133 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 SPATA2LQ8IUW3 424 aaPredicted RBP4.8□□□□□ -1.64
SRRM1-219ENST00000495561 IQCF1Q8N6M8 205 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 SUN3Q8TAQ9 357 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 NEUROG1Q92886 237 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 ATP2A3Q93084 1043 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 LMLNQ96KR4 655 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 FAM227BQ96M60 508 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 SENP7Q9BQF6 1050 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 PIMREGQ9BSJ6 248 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 FZD3Q9NPG1 666 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 OGDHLQ9ULD0 1010 aa4.8□□□□□ -1.64
SRRM1-219ENST00000495561 NOP58Q9Y2X3 529 aaKnown RBP4.8□□□□□ -1.64
SRRM1-219ENST00000495561 HMGXB3Q12766 1538 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 KIR2DS5A0A0G2JLQ3 304 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 KIR2DS3K7RE56 304 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 TNFRSF13BO14836 293 aaPredicted RBP4.79□□□□□ -1.64
SRRM1-219ENST00000495561 IGSF3O75054 1194 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 NDUFS1P28331 727 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 DUSP1P28562 367 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 HOXD12P35452 270 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 PBX1P40424 430 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 DGKQP52824 942 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 KCNJ12Q14500 433 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 NUDCD2Q8WVJ2 157 aa4.79□□□□□ -1.64
SRRM1-219ENST00000495561 IPCEF1Q8WWN9 437 aaPredicted RBP4.79□□□□□ -1.64
SRRM1-219ENST00000495561 OIT3Q8WWZ8 545 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms