RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 ZDHHC4Q9NPG8 344 aa15.37■□□□□ 0.05
SS18L1-205ENST00000492466 FAM207AQ9NSI2 230 aaPredicted RBP15.37■□□□□ 0.05
SS18L1-205ENST00000492466 TBC1D14Q9P2M4 693 aa15.37■□□□□ 0.05
SS18L1-205ENST00000492466 RASAL2Q9UJF2 1139 aa15.37■□□□□ 0.05
SS18L1-205ENST00000492466 LSM7Q9UK45 103 aaKnown RBP15.37■□□□□ 0.05
SS18L1-205ENST00000492466 FHOD1Q9Y613 1164 aa15.37■□□□□ 0.05
SS18L1-205ENST00000492466 GON4LQ3T8J9 2241 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 TULP2O00295 520 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 PIK3R2O00459 728 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 KRT37O76014 449 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 ADH1CP00326 375 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 PNMA6AP0CW24 399 aaPredicted RBP15.36■□□□□ 0.05
SS18L1-205ENST00000492466 PMLP29590 882 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 ATP5C1P36542 298 aaKnown RBP15.36■□□□□ 0.05
SS18L1-205ENST00000492466 GRIA2P42262 883 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 YWHAGP61981 247 aaKnown RBP eCLIP15.36■□□□□ 0.05
SS18L1-205ENST00000492466 DRAP1Q14919 205 aaPredicted RBP15.36■□□□□ 0.05
SS18L1-205ENST00000492466 SYCP1Q15431 976 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 ZSCAN23Q3MJ62 389 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 USP39Q53GS9 565 aaKnown RBP15.36■□□□□ 0.05
SS18L1-205ENST00000492466 KLHDC7AQ5VTJ3 777 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 BTBD8Q5XKL5 378 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 TMEM25Q86YD3 366 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 PASD1Q8IV76 773 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 FRMD1Q8N878 549 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 RNF139Q8WU17 664 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 OTUB2Q96DC9 234 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 UBXN6Q9BZV1 441 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 ARHGEF4Q9NR80 690 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 OSER1Q9NX31 292 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 LIMA1Q9UHB6 759 aaKnown RBP15.36■□□□□ 0.05
SS18L1-205ENST00000492466 AJAP1Q9UKB5 411 aaPredicted RBP15.36■□□□□ 0.05
SS18L1-205ENST00000492466 STRIP2Q9ULQ0 834 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 CHD6Q8TD26 2715 aa15.36■□□□□ 0.05
SS18L1-205ENST00000492466 LNP1A1A4G5 178 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 TRIM24O15164 1050 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 HOXC11O43248 304 aaPredicted RBP15.35■□□□□ 0.05
SS18L1-205ENST00000492466 KLF8O95600 359 aaPredicted RBP15.35■□□□□ 0.05
SS18L1-205ENST00000492466 TBX18O95935 607 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 SERPINC1P01008 464 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 APODP05090 189 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 ATP1A3P13637 1013 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 UCHL3P15374 230 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 GBP1P32455 592 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 KRT9P35527 623 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 TIE1P35590 1138 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 P2RY2P41231 377 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 TNFRSF4P43489 277 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 BPIFB4P59827 614 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 NCAPHQ15003 741 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 HSF5Q4G112 596 aaPredicted RBP15.35■□□□□ 0.05
SS18L1-205ENST00000492466 RNF43Q68DV7 783 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 MIB1Q86YT6 1006 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 DHX40Q8IX18 779 aaKnown RBP15.35■□□□□ 0.05
SS18L1-205ENST00000492466 NOX5Q96PH1 765 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 MIS12Q9H081 205 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 SYNCQ9H7C4 482 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 NMUR1Q9HB89 426 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 DNMT3LQ9UJW3 386 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 NUDT5Q9UKK9 219 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 CNTN6Q9UQ52 1028 aa15.35■□□□□ 0.05
SS18L1-205ENST00000492466 PATE3B3GLJ2 98 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 CDX4O14627 284 aaPredicted RBP15.34■□□□□ 0.05
SS18L1-205ENST00000492466 MDM4O15151 490 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 TULP3O75386 442 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 KCNK5O95279 499 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 ACADSBP45954 432 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 KLK7P49862 253 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 POLR2FP61218 127 aaKnown RBP15.34■□□□□ 0.05
SS18L1-205ENST00000492466 GAD2Q05329 585 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 KDSRQ06136 332 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 KCNMA1Q12791 1236 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 EFEMP1Q12805 493 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 RAB41Q5JT25 222 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 DENND1BQ6P3S1 775 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 HTR3DQ70Z44 454 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 C11orf74Q86VG3 221 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 NAT16Q8N8M0 369 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 IPO4Q8TEX9 1081 aaKnown RBP15.34■□□□□ 0.05
SS18L1-205ENST00000492466 ZNF606Q8WXB4 792 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 RLN3Q8WXF3 142 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 KCTD13Q8WZ19 329 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 FAM149B1Q96BN6 582 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 P2RY11Q96G91 374 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 EDEM2Q9BV94 578 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 KLF16Q9BXK1 252 aaPredicted RBP15.34■□□□□ 0.05
SS18L1-205ENST00000492466 CD248Q9HCU0 757 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 ACP6Q9NPH0 428 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 NLRC4Q9NPP4 1024 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 PLCB1Q9NQ66 1216 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 CYLDQ9NQC7 956 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 CNGB3Q9NQW8 809 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 SPHK2Q9NRA0 654 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 OLA1Q9NTK5 396 aaKnown RBP15.34■□□□□ 0.05
SS18L1-205ENST00000492466 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.34■□□□□ 0.05
SS18L1-205ENST00000492466 CLIC5Q9NZA1 410 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 MBD1Q9UIS9 605 aaPredicted RBP15.34■□□□□ 0.05
SS18L1-205ENST00000492466 USP3Q9Y6I4 520 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 AKAP13Q12802 2813 aa15.34■□□□□ 0.05
SS18L1-205ENST00000492466 C4orf47A7E2U8 309 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms