RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 BTBD16Q32M84 506 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 CERKLQ49MI3 558 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 ATPAF1Q5TC12 328 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 SULT6B1Q6IMI4 303 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 MSANTD2Q6P1R3 559 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 DCDC5Q6ZRR9 648 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 CACNA2D3Q8IZS8 1091 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 PNLDC1Q8NA58 520 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 SLC22A17Q8WUG5 538 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 TRIM63Q969Q1 353 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 EDC3Q96F86 508 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 ADGRE3Q9BY15 652 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 MAGEH1Q9H213 219 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 GRHPRQ9UBQ7 328 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 HERC5Q9UII4 1024 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 UBE2J1Q9Y385 318 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 PCDHB7Q9Y5E2 793 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 MORC2Q9Y6X9 1032 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 COL11A2P13942 1736 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 FANCIQ9NVI1 1328 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 POC1B-GALNT4F8VUJ3 575 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 CLIC1O00299 241 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 DHHO43323 396 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 PROP1O75360 226 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 RPP40O75818 363 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 ACTL6BO94805 426 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 POLE2P56282 527 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 AP2B1P63010 937 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 TIGD6Q17RP2 521 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 C4orf46Q504U0 113 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 CC2D1BQ5T0F9 858 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 PRAMEF17Q5VTA0 474 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 ANKRD40Q6AI12 368 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 VSTM1Q6UX27 236 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 GALNT4Q8N4A0 578 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 LINC01465Q8N7H1 131 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 SPATA5Q8NB90 893 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 FAM98AQ8NCA5 519 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 ADAMTS18Q8TE60 1221 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 RUBCNQ92622 972 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 EVI5LQ96CN4 794 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 EID2BQ96D98 161 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 FAR2Q96K12 515 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 RTKNQ9BST9 563 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 SORBS1Q9BX66 1292 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 BRD8Q9H0E9 1235 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 SLITRK6Q9H5Y7 841 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 ASIC5Q9NY37 505 aa4.42□□□□□ -1.7
ECHDC1-217ENST00000488087 CCDC187A0A096LP49 1063 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 TCRBV5S1A1TA0A578 114 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 MANSC4A6NHS7 340 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 TTC34A8MYJ7 566 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 KIF28PB7ZC32 967 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 BTBD19C9JJ37 291 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 CREB3O43889 395 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 PPFIA2O75334 1257 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 C1RP00736 705 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 MATN1P21941 496 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 THBS4P35443 961 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 HALP42357 657 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 GRK6P43250 576 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 WDR5P61964 334 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 RNASELQ05823 741 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 PRKG1Q13976 671 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 LARS2Q15031 903 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 RPS6KA2Q15349 733 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 SMN1Q16637 294 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 PROSER3Q2NL68 480 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 INO80DQ53TQ3 878 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 HSP90AB4PQ58FF6 505 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 ZNF569Q5MCW4 686 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 LIN54Q6MZP7 749 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 ACSM6Q6P461 480 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 TRABD2AQ86V40 505 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 CHSY1Q86X52 802 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 DNAJC10Q8IXB1 793 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 C16orf71Q8IYS4 520 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 ANKRD42Q8N9B4 389 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 OR52L2PQ8NGH6 319 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 TRAPPC12Q8WVT3 735 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 HMGB4Q8WW32 186 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 MCRS1Q96EZ8 462 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 REXO5Q96IC2 774 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 ASB2Q96Q27 587 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 MYLK2Q9H1R3 596 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 CCDC134Q9H6E4 229 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 AGO4Q9HCK5 861 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 ABHD10Q9NUJ1 306 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 FZD4Q9ULV1 537 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 NFU1Q9UMS0 254 aa4.41□□□□□ -1.7
ECHDC1-217ENST00000488087 HMX3A6NHT5 357 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 TMEM232C9JQI7 657 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 PPP6R2O75170 966 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 CHRM5P08912 532 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 NHLRC4P0CG21 123 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 DUSP1P28562 367 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 FOXO1Q12778 655 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 SF3A3Q12874 501 aaKnown RBP eCLIP4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 RAPGEF1Q13905 1077 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 CNGA3Q16281 694 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms