RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 PCDHGB6Q9Y5F9 930 aa2.97□□□□□ -1.93
KDM1A-204ENST00000481879 HEMK1Q9Y5R4 338 aaPredicted RBP2.97□□□□□ -1.93
KDM1A-204ENST00000481879 CKAP5Q14008 2032 aa2.97□□□□□ -1.93
KDM1A-204ENST00000481879 TRBV5-3A0A0A0MS03 114 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 A0A1W2PPC1 479 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 MBD3L4A6NDZ8 208 aaPredicted RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 MBD3L3A6NE82 208 aaPredicted RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 C16orf96A6NNT2 1141 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 PYCARD-AS1I3L0S3 204 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 PRPF4O43172 522 aaKnown RBP eCLIP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 CA12O43570 354 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 MARCH6O60337 910 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 FGF3P11487 239 aaPredicted RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 BRAFP15056 766 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 RPS6KB1P23443 525 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 MLH1P40692 756 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 KCNJ4P48050 445 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 EIF4A1P60842 406 aaKnown RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 STK3Q13188 491 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 MTA1Q13330 715 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 PPP4R4Q6NUP7 873 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 RBM44Q6ZP01 1051 aaKnown RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 USP49Q70CQ1 688 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 TFAP2DQ7Z6R9 452 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 SKAP1Q86WV1 359 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 MICU3Q86XE3 530 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 SPATA2LQ8IUW3 424 aaPredicted RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 ADGRF4Q8IZF3 695 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 LRTOMTQ8WZ04 291 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 NEUROG1Q92886 237 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 MIB2Q96AX9 1013 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 MSI2Q96DH6 328 aaKnown RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 P2RY11Q96G91 374 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 MED30Q96HR3 178 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 ZNF668Q96K58 619 aaPredicted RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 HIST1H2AAQ96QV6 131 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 APOL5Q9BWW9 433 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 DHX36Q9H2U1 1008 aaKnown RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 FZD3Q9NPG1 666 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 PAPOLBQ9NRJ5 636 aaKnown RBP2.96□□□□□ -1.94
KDM1A-204ENST00000481879 ANAPC4Q9UJX5 808 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 L1RE1Q9UN81 338 aa2.96□□□□□ -1.94
KDM1A-204ENST00000481879 USP19O94966 1318 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 GOLGA6CA6NDK9 693 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 GOLGA6BA6NDN3 693 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 UGDHO60701 494 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 SNX2O60749 519 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 ZBED1O96006 694 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 IGKV3-20P01619 116 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 GOLGA6DP0CG33 693 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 TMIGD3P0DMS9 266 aaPredicted RBP2.95□□□□□ -1.94
KDM1A-204ENST00000481879 RHCEP18577 417 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 KLRC1P26715 233 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 PEX2P28328 305 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 GALNSP34059 522 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 WDR5P61964 334 aaKnown RBP2.95□□□□□ -1.94
KDM1A-204ENST00000481879 LTBQ06643 244 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 SLC29A2Q14542 456 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 KIAA0753Q2KHM9 967 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 GFI1BQ5VTD9 330 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 CYB5RLQ6IPT4 315 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 CLEC9AQ6UXN8 241 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 TRAPPC11Q7Z392 1133 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 CUZD1Q86UP6 607 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 UEVLDQ8IX04 471 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 SMCR8Q8TEV9 937 aaPredicted RBP2.95□□□□□ -1.94
KDM1A-204ENST00000481879 STK31Q9BXU1 1019 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 RBM38Q9H0Z9 239 aaKnown RBP2.95□□□□□ -1.94
KDM1A-204ENST00000481879 VPS45Q9NRW7 570 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 GJB4Q9NTQ9 266 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 GOLGA6AQ9NYA3 693 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 CPNE7Q9UBL6 633 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 HDAC9Q9UKV0 1011 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 AGO2Q9UKV8 859 aaKnown RBP2.95□□□□□ -1.94
KDM1A-204ENST00000481879 SLC27A6Q9Y2P4 619 aa2.95□□□□□ -1.94
KDM1A-204ENST00000481879 TRIM43BA6NCK2 446 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 AQP7P3A6NL99 342 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 PRSS47A8MTI9 375 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 RAB27BO00194 218 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 ATG13O75143 517 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 MBPP02686 304 aaPredicted RBP2.94□□□□□ -1.94
KDM1A-204ENST00000481879 TMEM225BP0DP42 221 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 ST6GAL1P15907 406 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 TPH1P17752 444 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 TFEBP19484 476 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 NTSR1P30989 418 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 CPT1AP50416 773 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 SUMO3P55854 103 aaPredicted RBP2.94□□□□□ -1.94
KDM1A-204ENST00000481879 RPS16P62249 146 aaKnown RBP2.94□□□□□ -1.94
KDM1A-204ENST00000481879 DNASE1L3Q13609 305 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 KEAP1Q14145 624 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 CLCA4Q14CN2 919 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 C3orf38Q5JPI3 329 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 RNF220Q5VTB9 566 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 NUGGCQ68CJ6 796 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 CHST15Q7LFX5 561 aaPredicted RBP2.94□□□□□ -1.94
KDM1A-204ENST00000481879 DGKHQ86XP1 1220 aa2.94□□□□□ -1.94
KDM1A-204ENST00000481879 OIT3Q8WWZ8 545 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms