RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 RIOX2Q8IUF8 465 aa7.96□□□□□ -1.14
SPTBN1-204ENST00000467371 DNAJC10Q8IXB1 793 aa7.96□□□□□ -1.14
SPTBN1-204ENST00000467371 SLC26A7Q8TE54 656 aa7.96□□□□□ -1.14
SPTBN1-204ENST00000467371 HDAC10Q969S8 669 aa7.96□□□□□ -1.14
SPTBN1-204ENST00000467371 RPGRIP1Q96KN7 1286 aa7.96□□□□□ -1.14
SPTBN1-204ENST00000467371 TSC22D3Q99576 134 aa7.96□□□□□ -1.14
SPTBN1-204ENST00000467371 ADNPQ9H2P0 1102 aa7.96□□□□□ -1.14
SPTBN1-204ENST00000467371 PCDHB11Q9Y5F2 797 aa7.96□□□□□ -1.14
SPTBN1-204ENST00000467371 COMMD3-BMI1R4GMX3 469 aa7.96□□□□□ -1.14
SPTBN1-204ENST00000467371 ADAMTSL3P82987 1691 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 A0A0D9SFI3 127 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 MEIS3P2A8K0S8 358 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 KPNA7A9QM74 516 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 IFIT3O14879 490 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 CYP27B1O15528 508 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 FAM155BO75949 473 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PABPC1P11940 636 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 GLRA2P23416 452 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 TM4SF1P30408 202 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 GP5P40197 560 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 SCTRP47872 440 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PITPNBP48739 271 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 CACNB1Q02641 598 aaPredicted RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 CHAF1BQ13112 559 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PLS1Q14651 629 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 CCDC142Q17RM4 750 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 SPRED3Q2MJR0 410 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 IGSF11Q5DX21 431 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 CCDC121Q6ZUS5 278 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 LIX1LQ8IVB5 337 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 CNTN4Q8IWV2 1026 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 SRBD1Q8N5C6 995 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 FSIP1Q8NA03 581 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 WNK4Q96J92 1243 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 ANKRD27Q96NW4 1050 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 NUP85Q9BW27 656 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 COLEC11Q9BWP8 271 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 OPA3Q9H6K4 179 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 NOL6Q9H6R4 1146 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 SARS2Q9NP81 518 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 RBM8AQ9Y5S9 174 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 NRXN3Q9Y4C0 1643 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 POM121BA6NF01 834 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 GTPBP1O00178 669 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 TAF4O00268 1085 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 TO15178 435 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 BUB1BO60566 1050 aaPredicted RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 TLR2O60603 784 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 KLHL2O95198 593 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 TFRCP02786 760 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 POTEJP0CG39 1038 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 MAGEA4P43358 317 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 MYO1EQ12965 1108 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 ITGA7Q13683 1181 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 LRRC23Q53EV4 343 aaPredicted RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 ZNF569Q5MCW4 686 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 TRIM72Q6ZMU5 477 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 TRAPPC11Q7Z392 1133 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PALM2Q8IXS6 379 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 SLC35F6Q8N357 371 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 HIPK4Q8NE63 616 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 GRIN3AQ8TCU5 1115 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 DDI1Q8WTU0 396 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 MRPS27Q92552 414 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 VPS33AQ96AX1 596 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 DBNDD2Q9BQY9 259 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 LY9Q9HBG7 655 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PNPLA8Q9NP80 782 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 TMEM184CQ9NVA4 438 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 TUBE1Q9UJT0 475 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 APPL1Q9UKG1 709 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 USP15Q9Y4E8 981 aaPredicted RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 COL15A1P39059 1388 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 A0A1B0GVL5 298 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 C5orf60A6NFR6 353 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 CBX4O00257 560 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PITPNM1O00562 1244 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 LILRB5O75023 590 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 LUC7L3O95232 432 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 JUPP14923 745 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 ATXN3P54252 364 aaPredicted RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 ADKP55263 362 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PSMC6P62333 389 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 OLR1P78380 273 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 MYL5Q02045 173 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 ELP6Q0PNE2 266 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 DGKZQ13574 1117 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 CUL3Q13618 768 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 NCF4Q15080 339 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 CLEC16AQ2KHT3 1053 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PABPC1LQ4VXU2 614 aaKnown RBP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 ZBTB41Q5SVQ8 909 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 GRTP1Q5TC63 336 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 NBPF14Q5TI25 921 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 SPECC1LQ69YQ0 1117 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 Q6ZUG5 572 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 SYNE4Q8N205 404 aa7.95□□□□□ -1.14
SPTBN1-204ENST00000467371 SCML4Q8N228 414 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms