RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 LRRC45Q96CN5 670 aa23.71■■□□□ 1.39
PTX3-201ENST00000295927 YME1L1Q96TA2 773 aa23.71■■□□□ 1.39
PTX3-201ENST00000295927 WDCPQ9H6R7 721 aa23.71■■□□□ 1.39
PTX3-201ENST00000295927 MTRF1LQ9UGC7 380 aaKnown RBP23.71■■□□□ 1.39
PTX3-201ENST00000295927 AMPD1P23109 780 aa23.7■■□□□ 1.38
PTX3-201ENST00000295927 OR1D2P34982 312 aa23.7■■□□□ 1.38
PTX3-201ENST00000295927 DENND5BQ6ZUT9 1274 aa23.7■■□□□ 1.38
PTX3-201ENST00000295927 ZC3H18Q86VM9 953 aaKnown RBP23.7■■□□□ 1.38
PTX3-201ENST00000295927 MON1AQ86VX9 555 aa23.7■■□□□ 1.38
PTX3-201ENST00000295927 KRT222Q8N1A0 295 aa23.7■■□□□ 1.38
PTX3-201ENST00000295927 RNF139Q8WU17 664 aa23.7■■□□□ 1.38
PTX3-201ENST00000295927 SPATA17Q96L03 361 aa23.7■■□□□ 1.38
PTX3-201ENST00000295927 OSER1Q9NX31 292 aa23.7■■□□□ 1.38
PTX3-201ENST00000295927 H3BRJ5 948 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 ZFXP17010 805 aaPredicted RBP23.69■■□□□ 1.38
PTX3-201ENST00000295927 ITGA8P53708 1063 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 GDF10P55107 478 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 DHX9Q08211 1270 aaKnown RBP23.69■■□□□ 1.38
PTX3-201ENST00000295927 ARL13BQ3SXY8 428 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 UNC45BQ8IWX7 931 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 RSAD2Q8WXG1 361 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 PCDH9Q9HC56 1237 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 SPG21Q9NZD8 308 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 ZBBXA8MT70 800 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 CREB3O43889 395 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 RTN3O95197 1032 aaPredicted RBP23.69■■□□□ 1.38
PTX3-201ENST00000295927 IFNB1P01574 187 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 YWHAQP27348 245 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 PPIGQ13427 754 aaKnown RBP eCLIP23.69■■□□□ 1.38
PTX3-201ENST00000295927 EIF4EBP2Q13542 120 aaPredicted RBP23.69■■□□□ 1.38
PTX3-201ENST00000295927 DARS2Q6PI48 645 aaKnown RBP23.69■■□□□ 1.38
PTX3-201ENST00000295927 RHBDF2Q6PJF5 856 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 B4GALNT4Q76KP1 1039 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 BADQ92934 168 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 CLSTN3Q9BQT9 956 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 TXLNGYQ9BZA5 131 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 TKTL2Q9H0I9 626 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 SMOC2Q9H3U7 446 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 ETNK2Q9NVF9 386 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 GMIPQ9P107 970 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 PRKAG2Q9UGJ0 569 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 ANAPC5Q9UJX4 755 aa23.69■■□□□ 1.38
PTX3-201ENST00000295927 FAM92AA1XBS5 289 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 GOLGA6BA6NDN3 693 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 H7C0C1 242 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 IRAK2O43187 625 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 FGBP02675 491 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 ATP5OP48047 213 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 RPL10AP62906 217 aaKnown RBP23.68■■□□□ 1.38
PTX3-201ENST00000295927 DSG1Q02413 1049 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 P3H1Q32P28 736 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 IZUMO3Q5VZ72 239 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 ALS2CLQ60I27 953 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 NCBP2-AS2Q69YL0 99 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 ARHGAP18Q8N392 663 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 BBOF1Q8ND07 529 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 CASP10Q92851 521 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 HERC2P3Q9BVR0 1158 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 ARHGEF4Q9NR80 690 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 NUDT5Q9UKK9 219 aa23.68■■□□□ 1.38
PTX3-201ENST00000295927 FAM72CH0Y354 149 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 PPFIA2O75334 1257 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 MAP3K6O95382 1288 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 HSD17B3P37058 310 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 GLUD2P49448 558 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 CAV1Q03135 178 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 GBE1Q04446 702 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 GPS1Q13098 491 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 GPS2Q13227 327 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 MTMR3Q13615 1198 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 UAP1Q16222 522 aaPredicted RBP23.67■■□□□ 1.38
PTX3-201ENST00000295927 FAM72AQ5TYM5 149 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 FAM72DQ6L9T8 149 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 FAM72BQ86X60 149 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 RNF34Q969K3 372 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 SFMBT1Q9UHJ3 866 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 MFHAS1Q9Y4C4 1052 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 AGPSO00116 658 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 EEF2KO00418 725 aaKnown RBP23.67■■□□□ 1.38
PTX3-201ENST00000295927 FAM193AP78312 1265 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 SLC10A2Q12908 348 aaPredicted RBP23.67■■□□□ 1.38
PTX3-201ENST00000295927 SEMA3BQ13214 749 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 CFAP58Q5T655 872 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 IQCKQ8N0W5 287 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 FAM71DQ8N9W8 422 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 FBXO32Q969P5 355 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 PRDM16Q9HAZ2 1276 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 ATP8A1Q9Y2Q0 1164 aa23.67■■□□□ 1.38
PTX3-201ENST00000295927 CARNS1A5YM72 827 aa23.66■■□□□ 1.38
PTX3-201ENST00000295927 NR2C2P49116 596 aa23.66■■□□□ 1.38
PTX3-201ENST00000295927 FPGSQ05932 587 aa23.66■■□□□ 1.38
PTX3-201ENST00000295927 DDX53Q86TM3 631 aaKnown RBP23.66■■□□□ 1.38
PTX3-201ENST00000295927 GIPC2Q8TF65 315 aa23.66■■□□□ 1.38
PTX3-201ENST00000295927 ZIM3Q96PE6 472 aa23.66■■□□□ 1.38
PTX3-201ENST00000295927 ADAM7Q9H2U9 754 aa23.66■■□□□ 1.38
PTX3-201ENST00000295927 H3BQF6 201 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 DNALI1O14645 258 aaPredicted RBP23.65■■□□□ 1.38
PTX3-201ENST00000295927 RRP9O43818 475 aaKnown RBP23.65■■□□□ 1.38
PTX3-201ENST00000295927 ATF6P18850 670 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 STIP1P31948 543 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms