RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 GEN1Q17RS7 908 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 ARMCX6Q7L4S7 300 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 CYP2U1Q7Z449 544 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 TRMT11Q7Z4G4 463 aaKnown RBP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 C11orf74Q86VG3 221 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 FMNL3Q8IVF7 1028 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 FAM217AQ8IXS0 508 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 CHPFQ8IZ52 775 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 PGBD3Q8N328 593 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 PPM1KQ8N3J5 372 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 RBBP8NLQ8NC74 664 aaPredicted RBP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 EHBP1Q8NDI1 1231 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 IPO4Q8TEX9 1081 aaKnown RBP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 CLEC4CQ8WTT0 213 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 KCTD13Q8WZ19 329 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 PIGKQ92643 395 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 PIWIL1Q96J94 861 aaKnown RBP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 KREMEN1Q96MU8 473 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 GABRG3Q99928 467 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 SRRTQ9BXP5 876 aaKnown RBP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 DCLK3Q9C098 648 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 LRRC4Q9HBW1 653 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 CD93Q9NPY3 652 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 TMEM74BQ9NUR3 256 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 CALCOCO1Q9P1Z2 691 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 STRIP2Q9ULQ0 834 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 ZNF510Q9Y2H8 683 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 SLC27A6Q9Y2P4 619 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 IGF2RP11717 2491 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 NUP205Q92621 2012 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 ZZEF1O43149 2961 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 ASCC3Q8N3C0 2202 aaKnown RBP9.97□□□□□ -0.81
HMHB1-201ENST00000289448 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 BICDL2A1A5D9 508 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 C4orf47A7E2U8 309 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 CDX4O14627 284 aaPredicted RBP9.97□□□□□ -0.81
HMHB1-201ENST00000289448 P4HA2O15460 535 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 MAP3K13O43283 966 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 MSI1O43347 362 aaKnown RBP9.97□□□□□ -0.81
HMHB1-201ENST00000289448 SETSIPP0DME0 302 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 LCP1P13796 627 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 PTMSP20962 102 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 CHKAP35790 457 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 PPP1R2P41236 205 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 MARSP56192 900 aaKnown RBP9.97□□□□□ -0.81
HMHB1-201ENST00000289448 DAOAP59103 153 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 IRX4P78413 519 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 PAK1Q13153 545 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 TMEM215Q68D42 235 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 RNF43Q68DV7 783 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 IL31Q6EBC2 164 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 NUDT18Q6ZVK8 323 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 LPCAT2Q7L5N7 544 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 SIX6OS1Q8N1H7 587 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 SCML4Q8N228 414 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 CPXM2Q8N436 756 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 DEFB119Q8N690 84 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 SORCS1Q8WY21 1168 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 EDEM2Q9BV94 578 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 LSM14BQ9BX40 385 aaKnown RBP9.97□□□□□ -0.81
HMHB1-201ENST00000289448 INTS2Q9H0H0 1204 aaKnown RBP9.97□□□□□ -0.81
HMHB1-201ENST00000289448 CNGB3Q9NQW8 809 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 STON1Q9Y6Q2 735 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 AKAP13Q12802 2813 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 CFAP47Q6ZTR5 3102 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 PI4KAP42356 2102 aa9.97□□□□□ -0.81
HMHB1-201ENST00000289448 IGHV1OR15-9A0A0B4J2B8 117 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 M0QYV0 167 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 KHNYNO15037 678 aaKnown RBP9.96□□□□□ -0.82
HMHB1-201ENST00000289448 TSPAN3O60637 253 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 AFPP02771 609 aaKnown RBP9.96□□□□□ -0.82
HMHB1-201ENST00000289448 FYNP06241 537 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 ITPKAP23677 461 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 HOXD9P28356 352 aaPredicted RBP9.96□□□□□ -0.82
HMHB1-201ENST00000289448 IL12RB1P42701 662 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 SGSHP51688 502 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 APBA1Q02410 837 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 GCNT1Q02742 428 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 ENPP2Q13822 863 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 CAMK4Q16566 473 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 DENND1BQ6P3S1 775 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 GJB7Q6PEY0 223 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 IRF2BP1Q8IU81 584 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 DDI1Q8WTU0 396 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 RNF139Q8WU17 664 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 PLD4Q96BZ4 506 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 SPACA7Q96KW9 195 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 MRGPRX1Q96LB2 322 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 CNTNAP3BQ96NU0 1288 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 CRACR2AQ9BSW2 395 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 CNTNAP3Q9BZ76 1288 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 ACP6Q9NPH0 428 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 FSCN3Q9NQT6 498 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 OLA1Q9NTK5 396 aaKnown RBP9.96□□□□□ -0.82
HMHB1-201ENST00000289448 KIAA1468Q9P260 1216 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 THAP10Q9P2Z0 257 aaPredicted RBP9.96□□□□□ -0.82
HMHB1-201ENST00000289448 CYTH4Q9UIA0 394 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 STOML2Q9UJZ1 356 aa9.96□□□□□ -0.82
HMHB1-201ENST00000289448 CNTN6Q9UQ52 1028 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms