RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Ppp1r36D3Z0R2 411 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Gm3264L7N2C5 238 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 PtenO08586 403 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Foxm1O08696 760 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 SykP48025 629 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Mrgprx2Q3UG50 352 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Hmgb4Q6P8W9 181 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Gucy1b2Q8BXH3 824 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Amigo3Q8C2S7 508 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Parp9Q8CAS9 866 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Usp27Q8CEG8 438 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 D630039A03RikQ8K0M7 236 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Eva1bQ8K2Y3 164 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Eif3hQ91WK2 352 aaKnown RBP14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Basp1Q91XV3 226 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 MutyhQ99P21 515 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Mtif3Q9CZD5 276 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Gpatch1Q9DBM1 930 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Cyp3a44Q9EQW4 504 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Erich1E9PY43 332 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 AaasP58742 546 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Siah1aP61092 282 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Faf2Q3TDN2 445 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Srebf2Q3U1N2 1130 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Cd300ldQ8VCH2 221 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Rec114Q9CWH4 259 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Serbp1Q9CY58 407 aaKnown RBP14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Gid8Q9D7M1 228 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Smok2bQ9QYZ3 484 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 Smok2aQ9QYZ6 504 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 NumbQ9QZS3 653 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 NktrP30415 1453 aa14.65□□□□□ -0.06
Col2a1-202ENSMUST00000088355 TpbpaP13438 124 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Irf5P56477 497 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Zfp560Q3URI6 754 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Rcsd1Q3UZA1 412 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Gcnt3Q5JCT0 437 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Tas2r109Q7M707 316 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Kirrel3Q8BR86 778 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Ccdc17Q8CE13 565 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Mtrf1Q8K126 446 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 DeraQ91YP3 318 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Atp6ap2Q9CYN9 350 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 MrrfQ9D6S7 262 aaKnown RBP14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Dpysl5Q9EQF6 564 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Cdc42ep5Q9Z0X0 150 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Gm4302E9PX25 294 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Srp72F8VQC1 671 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 AcadmP45952 421 aaKnown RBP14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Kcnt1Q6ZPR4 1224 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Gga3Q8BMI3 718 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Robo4Q8C310 1012 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Pcdhgb5Q91XX5 926 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Slc39a3Q99K24 317 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Zfp64Q99KE8 643 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Lrrc71Q9D3W5 558 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 LrgukQ9D5S7 820 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 PigoQ9JJI6 1093 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Iigp1Q9QZ85 413 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Stk11Q9WTK7 436 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Ric1Q69ZJ7 1422 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Slfn3A0A1L1STQ7 640 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Dhtkd1A2ATU0 921 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Ttll6A4Q9E8 822 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Btg4O70552 250 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Shoc2O88520 582 aaKnown RBP14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Pms2P54279 859 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Ddx3xQ62167 662 aaKnown RBP14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Garem2Q6PAJ3 880 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Tas2r131Q7M708 310 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Pcdh19Q80TF3 1145 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 ChfrQ810L3 664 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Aldh5a1Q8BWF0 523 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Acsf2Q8VCW8 615 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 PigxQ99LV7 254 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Msh5Q9QUM7 833 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Olfr391-psA0A0U1RNJ4 312 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Trmt1lA2RSY6 728 aaKnown RBP14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Atp9aO70228 1047 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Il1rl1P14719 567 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Ptpn12P35831 775 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Traf2P39429 501 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Serping1P97290 504 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Gpatch4Q3TFK5 415 aaKnown RBP14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Dpysl3Q62188 570 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Gtf2a2Q80ZM7 109 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Pex19Q8VCI5 299 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Tfap2dQ91ZK0 452 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 DarsQ922B2 501 aaKnown RBP14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Gpn3Q9D3W4 284 aa14.64□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Armt1A6H630 439 aa14.63□□□□□ -0.07
Col2a1-202ENSMUST00000088355 FpgsP48760 587 aa14.63□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Gabpb1Q00420 383 aa14.63□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Sema3cQ62181 751 aa14.63□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Msantd2Q6NZR2 559 aa14.63□□□□□ -0.07
Col2a1-202ENSMUST00000088355 ZfatQ7TS63 1237 aa14.63□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Akr1c20Q8VC77 323 aa14.63□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Olfr615Q8VGY4 313 aa14.63□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Ruvbl2Q9WTM5 463 aaKnown RBP14.63□□□□□ -0.07
Col2a1-202ENSMUST00000088355 Rbck1Q9WUB0 508 aa14.63□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms