Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Gm25239-201ENSMUST00000174915 86 ntBASIC31,26■■■□□ 2,59
TpbpaP13438 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
TpbpaP13438 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
TpbpaP13438 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29,51■■■□□ 2,31
TpbpaP13438 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,57■■■□□ 2,16
TpbpaP13438 Psd-208ENSMUST00000224556 2034 ntBASIC28,5■■■□□ 2,15
TpbpaP13438 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
TpbpaP13438 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,27■■■□□ 2,12
TpbpaP13438 Gm15042-201ENSMUST00000120212 883 ntBASIC28,02■■■□□ 2,08
TpbpaP13438 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,87■■■□□ 2,05
TpbpaP13438 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,86■■■□□ 2,05
TpbpaP13438 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,62■■■□□ 2,01
TpbpaP13438 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,49■■□□□ 1,99
TpbpaP13438 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,47■■□□□ 1,99
TpbpaP13438 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,45■■□□□ 1,99
TpbpaP13438 Gm15045-201ENSMUST00000117359 883 ntBASIC27,44■■□□□ 1,98
TpbpaP13438 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,38■■□□□ 1,97
TpbpaP13438 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,23■■□□□ 1,95
TpbpaP13438 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,07■■□□□ 1,92
TpbpaP13438 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
TpbpaP13438 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26,88■■□□□ 1,89
TpbpaP13438 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
TpbpaP13438 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26,74■■□□□ 1,87
TpbpaP13438 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,74■■□□□ 1,87
TpbpaP13438 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26,74■■□□□ 1,87
TpbpaP13438 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26,73■■□□□ 1,87
TpbpaP13438 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26,71■■□□□ 1,87
TpbpaP13438 Gm24109-201ENSMUST00000175489 103 ntBASIC26,7■■□□□ 1,86
TpbpaP13438 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,66■■□□□ 1,86
TpbpaP13438 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26,6■■□□□ 1,85
TpbpaP13438 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,6■■□□□ 1,85
TpbpaP13438 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
TpbpaP13438 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
TpbpaP13438 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,49■■□□□ 1,83
TpbpaP13438 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
TpbpaP13438 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
TpbpaP13438 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,31■■□□□ 1,8
TpbpaP13438 Gm23366-201ENSMUST00000175022 89 ntBASIC26,25■■□□□ 1,79
TpbpaP13438 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26,22■■□□□ 1,79
TpbpaP13438 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,21■■□□□ 1,79
TpbpaP13438 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,21■■□□□ 1,79
TpbpaP13438 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,13■■□□□ 1,77
TpbpaP13438 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26,13■■□□□ 1,77
TpbpaP13438 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
TpbpaP13438 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,04■■□□□ 1,76
TpbpaP13438 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,03■■□□□ 1,76
TpbpaP13438 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,03■■□□□ 1,76
TpbpaP13438 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
TpbpaP13438 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
TpbpaP13438 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25,92■■□□□ 1,74
TpbpaP13438 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
TpbpaP13438 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,79■■□□□ 1,72
TpbpaP13438 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
TpbpaP13438 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,72■■□□□ 1,71
TpbpaP13438 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,64■■□□□ 1,7
TpbpaP13438 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
TpbpaP13438 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25,5■■□□□ 1,67
TpbpaP13438 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25,5■■□□□ 1,67
TpbpaP13438 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25,47■■□□□ 1,67
TpbpaP13438 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
TpbpaP13438 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25,39■■□□□ 1,66
TpbpaP13438 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25,3■■□□□ 1,64
TpbpaP13438 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
TpbpaP13438 Gm42596-201ENSMUST00000196305 1958 ntBASIC25,25■■□□□ 1,63
TpbpaP13438 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25,25■■□□□ 1,63
TpbpaP13438 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
TpbpaP13438 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
TpbpaP13438 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25,22■■□□□ 1,63
TpbpaP13438 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
TpbpaP13438 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25,17■■□□□ 1,62
TpbpaP13438 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25,15■■□□□ 1,62
TpbpaP13438 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
TpbpaP13438 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25,15■■□□□ 1,62
TpbpaP13438 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,11■■□□□ 1,61
TpbpaP13438 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25,08■■□□□ 1,61
TpbpaP13438 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1,59
TpbpaP13438 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24,99■■□□□ 1,59
TpbpaP13438 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24,98■■□□□ 1,59
TpbpaP13438 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24,92■■□□□ 1,58
TpbpaP13438 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24,9■■□□□ 1,58
TpbpaP13438 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24,85■■□□□ 1,57
TpbpaP13438 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,84■■□□□ 1,57
TpbpaP13438 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,82■■□□□ 1,56
TpbpaP13438 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
TpbpaP13438 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24,73■■□□□ 1,55
TpbpaP13438 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24,71■■□□□ 1,55
TpbpaP13438 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24,69■■□□□ 1,54
TpbpaP13438 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24,68■■□□□ 1,54
TpbpaP13438 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,65■■□□□ 1,54
TpbpaP13438 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,54
TpbpaP13438 Gm27325-201ENSMUST00000175467 74 ntBASIC24,64■■□□□ 1,54
TpbpaP13438 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
TpbpaP13438 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24,59■■□□□ 1,53
TpbpaP13438 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24,59■■□□□ 1,53
TpbpaP13438 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24,58■■□□□ 1,52
TpbpaP13438 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24,56■■□□□ 1,52
TpbpaP13438 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24,55■■□□□ 1,52
TpbpaP13438 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24,52■■□□□ 1,52
TpbpaP13438 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24,51■■□□□ 1,51
TpbpaP13438 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Retrieved 100 of 76,532 protein–RNA pairs in 11,8 ms