RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 NostrinQ6WKZ7 506 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dupd1Q8BK84 215 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 DeraQ91YP3 318 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rwdd4Q9CPR1 188 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Chchd3Q9CRB9 227 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tspan3Q9QY33 253 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sbno2Q7TNB8 1349 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Olfr1305A2AVW3 312 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Smok3aC0HKC8 504 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Smok3bC0HKC9 504 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm2832F7AEC7 200 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Marcksl1P28667 200 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rab17P35292 214 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cdh8P97291 799 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 R3hdm2Q80TM6 1044 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Slc25a24Q8BMD8 475 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cd300ldQ8VCH2 221 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rprd1aQ8VDS4 312 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ola1Q9CZ30 396 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 CinpQ9D0V8 212 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rhobtb1Q9DAK3 695 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kifc1Q9QWT9 674 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tbk1Q9WUN2 729 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm5152L7N200 190 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Prl6a1O35257 230 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sparcl1P70663 650 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tpd52Q62393 224 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tas2r115Q7M719 310 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 DcstampQ7TNJ0 470 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Vgll2Q8BGW8 322 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pnma2Q8BHK0 365 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Morc4Q8BMD7 928 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 SntnQ8C9X1 147 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ppp6r2Q8R3Q2 923 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Kdm4bQ91VY5 1086 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Fbxo32Q9CPU7 355 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mta2Q9R190 668 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 A530032D15RikE9Q422 215 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Zbtb11G5E8B9 1050 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Atp9aO70228 1047 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Msr1P30204 458 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 TdgP56581 421 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Shroom1Q5SX79 823 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Fbxw2Q60584 422 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tmem270Q6UJB9 264 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Strip2Q8C9H6 844 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Nsl1Q8K305 281 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rxfp2Q91ZZ5 737 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Zfp655Q9CZP3 541 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Poc5Q9DBS8 558 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Aff4Q9ESC8 1160 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cldn3Q9Z0G9 219 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tet3Q8BG87 1668 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ttc23lA6H6E9 458 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Bmpr2O35607 1038 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Psmb9P28076 219 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 DselQ0VBN2 1207 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Nudt18Q3U2V3 323 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 XpaQ64267 272 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Txndc8Q69AB2 127 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tas2r102Q7M717 329 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rps6ka6Q7TPS0 764 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Dis3lQ8C0S1 1053 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Amigo3Q8C2S7 508 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Slc39a3Q99K24 317 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mrpl1Q99N96 336 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Acot13Q9CQR4 140 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pitpnm1O35954 1243 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mmp15O54732 657 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 UgcgO88693 394 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Hsd17b7O88736 334 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Glb1P23780 647 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 SykP48025 629 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Wdr91Q7TMQ7 748 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Prdm8Q8BZ97 687 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Trub1Q8C0D0 338 aaKnown RBP10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Q8CIL4 281 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Aldh1a3Q9JHW9 512 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Trpc7Q9WVC5 862 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Col3a1P08121 1464 aa10.58□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gm4985A2ALC6 410 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cd19P25918 547 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Q3UE31 404 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Vil1Q62468 827 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tm4sf1Q64302 202 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Smim11aQ99J19 55 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sike1Q9CPR7 207 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cog8Q9JJA2 640 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Txnrd2Q9JLT4 524 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Net1Q9Z206 595 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Vmn2r100E9QAZ9 850 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Speer4cG3UXD1 256 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gm10354K7N6A0 256 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Stx7O70439 261 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rtn2O70622 471 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Polr1bP70700 1135 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tmc5Q32NZ6 967 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ndst1Q3UHN9 882 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sh2d1b2Q45HK4 132 aa10.57□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Wscd1Q80XH4 572 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms