RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 TRPM4Q8TD43 1214 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 ACMSDQ8TDX5 336 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 WDR60Q8WVS4 1066 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 FAM167BQ9BTA0 163 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 CCDC106Q9BWC9 280 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 STN1Q9H668 368 aaKnown RBP12.02□□□□□ -0.49
ZNF540-210ENST00000592533 DNAJB4Q9UDY4 337 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 HBS1LQ9Y450 684 aaKnown RBP12.02□□□□□ -0.49
ZNF540-210ENST00000592533 C2orf71A6NGG8 1288 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 NPTXRO95502 500 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 MLNP12872 115 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 SDC4P31431 198 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 HDAC4P56524 1084 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 TMPRSS15P98073 1019 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 KLC1Q07866 573 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 MUM1Q2TAK8 710 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 GOLGA7BQ2TAP0 167 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 LRRC74BQ6ZQY2 392 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 TREML1Q86YW5 311 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 ARMC2Q8NEN0 867 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 MECRQ9BV79 373 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 GGA3Q9NZ52 723 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 TAGLN3Q9UI15 199 aa12.02□□□□□ -0.49
ZNF540-210ENST00000592533 ZNF638Q14966 1978 aaKnown RBP12.01□□□□□ -0.49
ZNF540-210ENST00000592533 CCDC189A1A4V9 331 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 TBX10O75333 385 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 SERPINA6P08185 405 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 RPL34P49207 117 aaKnown RBP12.01□□□□□ -0.49
ZNF540-210ENST00000592533 SNX16P57768 344 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 CHI3L2Q15782 390 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 CA9Q16790 459 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 PMF1Q6P1K2 205 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 MARK2Q7KZI7 788 aaKnown RBP12.01□□□□□ -0.49
ZNF540-210ENST00000592533 EEPD1Q7L9B9 569 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 NUDCD3Q8IVD9 361 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 DHX37Q8IY37 1157 aaKnown RBP12.01□□□□□ -0.49
ZNF540-210ENST00000592533 SMC1BQ8NDV3 1235 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 SLC35F5Q8WV83 523 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 DPP3Q9NY33 737 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 HEY1Q9Y5J3 304 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 COL1A2P08123 1366 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 CAPN9O14815 690 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 UGT1A9O60656 530 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 CAPN15O75808 1086 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 NEBLO76041 1014 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 GSRP00390 522 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 DESP17661 470 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 L1CAMP32004 1257 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 PGM1P36871 562 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 GCLCP48506 637 aaPredicted RBP12.01□□□□□ -0.49
ZNF540-210ENST00000592533 NAB1Q13506 487 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 CDO1Q16878 200 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 TRMT5Q32P41 509 aaKnown RBP12.01□□□□□ -0.49
ZNF540-210ENST00000592533 DNAL1Q4LDG9 190 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 SYCP2LQ5T4T6 812 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 CRLF3Q8IUI8 442 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 UGT1A7Q9HAW7 530 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 UGT1A10Q9HAW8 530 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 UGT1A8Q9HAW9 530 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 PRDM16Q9HAZ2 1276 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 THAP1Q9NVV9 213 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 ERAP1Q9NZ08 941 aa12.01□□□□□ -0.49
ZNF540-210ENST00000592533 A0A0G2JLL6 359 aaPredicted RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 TM7SF2O76062 418 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 METTL18O95568 372 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 ARF4P18085 180 aaPredicted RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 AOC1P19801 751 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 CYP2F1P24903 491 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 ZRSR2Q15696 482 aaKnown RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 CCDC6Q16204 474 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 PRRT2Q7Z6L0 340 aaPredicted RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 TTC30AQ86WT1 665 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 ARID3BQ8IVW6 561 aaPredicted RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 STKLD1Q8NE28 680 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 STMN2Q93045 179 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 GPATCH2LQ9NWQ4 482 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 ARMCX1Q9P291 453 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 HESX1Q9UBX0 185 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 DERAQ9Y315 318 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 TSC2P49815 1807 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 SDR42E2A6NKP2 422 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 GABBR2O75899 941 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 SKIP12755 728 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 NIPAL4Q0D2K0 466 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 PPP1R26Q5T8A7 1209 aaPredicted RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 FAXCQ5TGI0 409 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 ARHGAP17Q68EM7 881 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 TRMT10BQ6PF06 316 aaKnown RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 ADGRF2Q8IZF7 708 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 RBM15BQ8NDT2 890 aaKnown RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 SCG3Q8WXD2 468 aaKnown RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 ZNF668Q96K58 619 aaPredicted RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 ACAP3Q96P50 834 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 OLFM3Q96PB7 478 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 GPAMQ9HCL2 828 aa12□□□□□ -0.49
ZNF540-210ENST00000592533 NGRNQ9NPE2 291 aaKnown RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 DDX43Q9NXZ2 648 aaKnown RBP12□□□□□ -0.49
ZNF540-210ENST00000592533 MORF4L1Q9UBU8 362 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms