RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 CCDC186Q7Z3E2 898 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 CACNA2D4Q7Z3S7 1137 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 IRF2BP1Q8IU81 584 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 PASD1Q8IV76 773 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 FMNL3Q8IVF7 1028 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 TRIM59Q8IWR1 403 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 ZNF513Q8N8E2 541 aaPredicted RBP6.65□□□□□ -1.34
LGMN-213ENST00000556790 TERB1Q8NA31 727 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 ANKRD52Q8NB46 1076 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 RBBP8NLQ8NC74 664 aaPredicted RBP6.65□□□□□ -1.34
LGMN-213ENST00000556790 CEP295NLQ96MC4 621 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 NT5C1BQ96P26 610 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 IER2Q9BTL4 223 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 INTS2Q9H0H0 1204 aaKnown RBP6.65□□□□□ -1.34
LGMN-213ENST00000556790 MTG2Q9H4K7 406 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 PLCB1Q9NQ66 1216 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 EHD2Q9NZN4 543 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 BCCIPQ9P287 314 aaKnown RBP eCLIP6.65□□□□□ -1.34
LGMN-213ENST00000556790 DEC1Q9P2X7 70 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 EBF1Q9UH73 591 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 XPO7Q9UIA9 1087 aaKnown RBP6.65□□□□□ -1.34
LGMN-213ENST00000556790 DNMT3LQ9UJW3 386 aa6.65□□□□□ -1.34
LGMN-213ENST00000556790 CDV3Q9UKY7 258 aaKnown RBP6.65□□□□□ -1.34
LGMN-213ENST00000556790 CELSR3Q9NYQ7 3312 aa6.65□□□□□ -1.35
LGMN-213ENST00000556790 CFAP47Q6ZTR5 3102 aa6.65□□□□□ -1.35
LGMN-213ENST00000556790 ZZEF1O43149 2961 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 NUMA1Q14980 2115 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 CNOT1A5YKK6 2376 aaKnown RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 BECN2A8MW95 431 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 SLC9A3R1O14745 358 aaPredicted RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 XPO1O14980 1071 aaKnown RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 TOP3BO95985 862 aaKnown RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 ZBED1O96006 694 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 FYNP06241 537 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 VDRP11473 427 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 KRT5P13647 590 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 HOXB2P14652 356 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 NDUFV2P19404 249 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 MAOBP27338 520 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 SLC6A4P31645 630 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 GGCXP38435 758 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 ANP32AP39687 249 aaKnown RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 GRIA2P42262 883 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 PLA2G4AP47712 749 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 DGKGP49619 791 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 TUBP50607 506 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 BCAT1P54687 386 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 DAOAP59103 153 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 AMPD2Q01433 879 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 BST2Q10589 180 aaKnown RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 STIM1Q13586 685 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 PUM1Q14671 1186 aaKnown RBP eCLIP6.64□□□□□ -1.35
LGMN-213ENST00000556790 CSRP2Q16527 193 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 MAP7D1Q3KQU3 841 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 DPCR1Q3MIW9 517 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 FBXO43Q4G163 708 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 BSPRYQ5W0U4 402 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 BTBD8Q5XKL5 378 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 MMS22LQ6ZRQ5 1243 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 RSRC2Q7L4I2 434 aaKnown RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 RASSF3Q86WH2 238 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 DDX42Q86XP3 938 aaKnown RBP eCLIP6.64□□□□□ -1.35
LGMN-213ENST00000556790 SCUBE3Q8IX30 993 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 CHPFQ8IZ52 775 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 EHBP1Q8NDI1 1231 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 CYB5D2Q8WUJ1 264 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 PIGKQ92643 395 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 ACDQ96AP0 544 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 DHTKD1Q96HY7 919 aaPredicted RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 CNOT6LQ96LI5 555 aaKnown RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 GTPBP4Q9BZE4 634 aaKnown RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 LRRC4Q9HBW1 653 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 CD248Q9HCU0 757 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 UBE2TQ9NPD8 197 aaPredicted RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 COMMD8Q9NX08 183 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 MARCH2Q9P0N8 246 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 CALCOCO1Q9P1Z2 691 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 KIAA1468Q9P260 1216 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 TBC1D14Q9P2M4 693 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 LSM7Q9UK45 103 aaKnown RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 CYP8B1Q9UNU6 501 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.64□□□□□ -1.35
LGMN-213ENST00000556790 NAALADL1Q9UQQ1 740 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 SLCO1B1Q9Y6L6 691 aa6.64□□□□□ -1.35
LGMN-213ENST00000556790 MUC22E2RYF6 1773 aaPredicted RBP6.64□□□□□ -1.35
LGMN-213ENST00000556790 SYNJ2BP-COX16A0A087WUM0 186 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 LNP1A1A4G5 178 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 C4orf47A7E2U8 309 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 KCNJ18B7U540 433 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 CACNG3O60359 315 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 STX10O60499 249 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 GRAP2O75791 330 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 LETM1O95202 739 aaPredicted RBP6.63□□□□□ -1.35
LGMN-213ENST00000556790 CAVIN2O95810 425 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 MOCS2O96007 188 aaPredicted RBP6.63□□□□□ -1.35
LGMN-213ENST00000556790 AFPP02771 609 aaKnown RBP6.63□□□□□ -1.35
LGMN-213ENST00000556790 RALAP11233 206 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 PFKLP17858 780 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 SPINK2P20155 84 aa6.63□□□□□ -1.35
LGMN-213ENST00000556790 ITPKAP23677 461 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms