RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PIH1D1Q9NWS0 290 aaKnown RBP21.87■■□□□ 1.09
COL18A1-207ENST00000473212 SIRPGQ9P1W8 387 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 PAPPA2Q9BXP8 1791 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 A0A087WZ62 844 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 AHCYL1O43865 530 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 PRPSAP2O60256 369 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 GNAT1P11488 350 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 IRX4P78413 519 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 CELF3Q5SZQ8 465 aaKnown RBP21.87■■□□□ 1.09
COL18A1-207ENST00000473212 LGSNQ5TDP6 509 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 SCUBE3Q8IX30 993 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 HPDLQ96IR7 371 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 ZNF184Q99676 751 aaPredicted RBP21.87■■□□□ 1.09
COL18A1-207ENST00000473212 FDXACB1Q9BRP7 624 aaPredicted RBP21.87■■□□□ 1.09
COL18A1-207ENST00000473212 THTPAQ9BU02 230 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 WWP1Q9H0M0 922 aa21.87■■□□□ 1.09
COL18A1-207ENST00000473212 DCAF8L1A6NGE4 600 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 PRKCHP24723 683 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 PMF1Q6P1K2 205 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 RIPOR1Q6ZS17 1223 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 ZCCHC23Q6ZST2 131 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 APLFQ8IW19 511 aaPredicted RBP21.86■■□□□ 1.09
COL18A1-207ENST00000473212 FAM167AQ96KS9 214 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 CNPY3Q9BT09 278 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 C2orf40Q9H1Z8 148 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 FAM49BQ9NUQ9 324 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 TAGLN3Q9UI15 199 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 PLA2G4CQ9UP65 541 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 MFHAS1Q9Y4C4 1052 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 GABBR2O75899 941 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 VTNP04004 478 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 CCNFP41002 786 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 MROH9Q5TGP6 573 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 CRLF3Q8IUI8 442 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 RILPQ96NA2 401 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 PANX3Q96QZ0 392 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 ETNK2Q9NVF9 386 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 NME7Q9Y5B8 376 aa21.86■■□□□ 1.09
COL18A1-207ENST00000473212 SCN1AP35498 2009 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 HMX2A2RU54 273 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 SPECC1L-ADORA2AF8WAN1 911 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 METTL18O95568 372 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 ZBED1O96006 694 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 APOEP02649 317 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 Q3C1V9 767 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 SLC30A9Q6PML9 568 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 UNC5AQ6ZN44 842 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 ILDR2Q71H61 639 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 ULK2Q8IYT8 1036 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 NDUFAF2Q8N183 169 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 KLC2Q9H0B6 622 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 TNFSF13BQ9Y275 285 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 C2CD2Q9Y426 696 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 SLC15A5A6NIM6 579 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 F8W8V4 182 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 FZD9O00144 591 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 TRDMT1O14717 391 aaKnown RBP21.85■■□□□ 1.09
COL18A1-207ENST00000473212 PPEF2O14830 753 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 TM7SF2O76062 418 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 CACNA2D1P54289 1103 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 NET1Q7Z628 596 aaPredicted RBP21.85■■□□□ 1.09
COL18A1-207ENST00000473212 SHKBP1Q8TBC3 707 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 CLEC4CQ8WTT0 213 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 FAM172AQ8WUF8 416 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 SNRNP25Q9BV90 132 aaKnown RBP21.85■■□□□ 1.09
COL18A1-207ENST00000473212 CCDC106Q9BWC9 280 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 PCDH18Q9HCL0 1135 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 PAPOLBQ9NRJ5 636 aaKnown RBP21.85■■□□□ 1.09
COL18A1-207ENST00000473212 ANGPTL2Q9UKU9 493 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 MAD1L1Q9Y6D9 718 aa21.85■■□□□ 1.09
COL18A1-207ENST00000473212 PRR5-ARHGAP8B1AHC4 643 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 LGR5O75473 907 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 CIB2O75838 187 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 KRT38O76015 456 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 TGFB3P10600 412 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 CALRP27797 417 aaKnown RBP21.84■■□□□ 1.09
COL18A1-207ENST00000473212 GMPRP36959 345 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 BCAR1P56945 870 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 ARHGAP8P85298 464 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 GBE1Q04446 702 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 SLC10A2Q12908 348 aaPredicted RBP21.84■■□□□ 1.09
COL18A1-207ENST00000473212 UBAP2LQ14157 1087 aaKnown RBP21.84■■□□□ 1.09
COL18A1-207ENST00000473212 PPP1R26Q5T8A7 1209 aaPredicted RBP21.84■■□□□ 1.09
COL18A1-207ENST00000473212 EBF4Q9BQW3 602 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 MIS12Q9H081 205 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 PDZD7Q9H5P4 517 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 SLC7A8Q9UHI5 535 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 HBS1LQ9Y450 684 aaKnown RBP21.84■■□□□ 1.09
COL18A1-207ENST00000473212 PTPRFP10586 1907 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 ANPEPP15144 967 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 CRADDP78560 199 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 AMHR2Q16671 573 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 GOLGA7BQ2TAP0 167 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 SH3D19Q5HYK7 790 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 ZNF534Q76KX8 674 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 APOBEC3FQ8IUX4 373 aaKnown RBP21.84■■□□□ 1.09
COL18A1-207ENST00000473212 GATA6Q92908 595 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 KHSRPQ92945 711 aaKnown RBP eCLIP21.84■■□□□ 1.09
COL18A1-207ENST00000473212 SH3GL3Q99963 347 aa21.84■■□□□ 1.09
COL18A1-207ENST00000473212 FRMD8Q9BZ67 464 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms