RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 PIN4Q9Y237 131 aaKnown RBP5.48□□□□□ -1.53
HMGB1-207ENST00000468384 TLR6Q9Y2C9 796 aa5.48□□□□□ -1.53
HMGB1-207ENST00000468384 HERC2O95714 4834 aa5.48□□□□□ -1.53
HMGB1-207ENST00000468384 ANK1P16157 1881 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 PLIN4Q96Q06 1357 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 CCDC187A0A096LP49 1063 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 A0A1B0GVM2 712 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 MKRN2OSH3BPM6 223 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 YKT6O15498 198 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 PHF1O43189 567 aaPredicted RBP5.47□□□□□ -1.53
HMGB1-207ENST00000468384 KLF4O43474 513 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 SIGLEC6O43699 453 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 MMP20O60882 483 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 CELA3AP09093 270 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 ACPPP15309 386 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 ATF2P15336 505 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 PDE6AP16499 860 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 SCNN1GP51170 649 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 RPL10AP62906 217 aaKnown RBP5.47□□□□□ -1.53
HMGB1-207ENST00000468384 POU4F1Q01851 419 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 ROR1Q01973 937 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 CYP4A11Q02928 519 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 SAMD5Q5TGI4 173 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 DTHD1Q6ZMT9 781 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 PLPPR4Q7Z2D5 763 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 ADAT2Q7Z6V5 191 aaKnown RBP5.47□□□□□ -1.53
HMGB1-207ENST00000468384 ZFAND4Q86XD8 727 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 DTX1Q86Y01 620 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 PHC3Q8NDX5 983 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 LCORQ96JN0 433 aaPredicted RBP5.47□□□□□ -1.53
HMGB1-207ENST00000468384 NT5C1AQ9BXI3 368 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 BTBD1Q9H0C5 482 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 SLC6A17Q9H1V8 727 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 TASP1Q9H6P5 420 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 GJB4Q9NTQ9 266 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 MIOSQ9NXC5 875 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 RTEL1Q9NZ71 1219 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 CCL26Q9Y258 94 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 PCDHA8Q9Y5H6 950 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 PCDHA5Q9Y5H7 936 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 BACE2Q9Y5Z0 518 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 RP1P56715 2156 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 ZBED9Q6R2W3 1325 aa5.47□□□□□ -1.53
HMGB1-207ENST00000468384 CNTRLQ7Z7A1 2325 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 NUP210Q8TEM1 1887 aaPredicted RBP5.46□□□□□ -1.54
HMGB1-207ENST00000468384 A0A1W2PQF6 199 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 ARL5CA6NH57 179 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 TRIM38O00635 465 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 NVLO15381 856 aaKnown RBP5.46□□□□□ -1.54
HMGB1-207ENST00000468384 GREM1O60565 184 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 PPP6R2O75170 966 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 CRLF1O75462 422 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 RTN3O95197 1032 aaPredicted RBP5.46□□□□□ -1.54
HMGB1-207ENST00000468384 C22orf31O95567 290 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 TSPY3P0CV98 308 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 TSPY8P0CW00 308 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 HOXB2P14652 356 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 TNFSF9P41273 254 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 LIG3P49916 1009 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 CLCN3P51790 818 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 C21orf59P57076 290 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 MESP2Q0VG99 397 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 BNIP3Q12983 259 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 HSP90AA2PQ14568 343 aaPredicted RBP5.46□□□□□ -1.54
HMGB1-207ENST00000468384 SART3Q15020 963 aaKnown RBP5.46□□□□□ -1.54
HMGB1-207ENST00000468384 CEBPEQ15744 281 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 SBK1Q52WX2 424 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 ARHGAP15Q53QZ3 475 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 SLC9C2Q5TAH2 1124 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 ZNF468Q5VIY5 522 aaPredicted RBP5.46□□□□□ -1.54
HMGB1-207ENST00000468384 BNC2Q6ZN30 1099 aaPredicted RBP5.46□□□□□ -1.54
HMGB1-207ENST00000468384 GAREM2Q75VX8 874 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 SV2BQ7L1I2 683 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 RIN3Q8TB24 985 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 DBNDD2Q9BQY9 259 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 ZKSCAN3Q9BRR0 538 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 GSX2Q9BZM3 304 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 ATXN3LQ9H3M9 355 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 CD248Q9HCU0 757 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 UBP1Q9NZI7 540 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 ZFATQ9P243 1243 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 ARPP21Q9UBL0 812 aaPredicted RBP5.46□□□□□ -1.54
HMGB1-207ENST00000468384 CACNG4Q9UBN1 327 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 CROTQ9UKG9 612 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 STRIP2Q9ULQ0 834 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 STX8Q9UNK0 236 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 AKT3Q9Y243 479 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 MRPL11Q9Y3B7 192 aaKnown RBP5.46□□□□□ -1.54
HMGB1-207ENST00000468384 ZNF532Q9HCE3 1301 aa5.46□□□□□ -1.54
HMGB1-207ENST00000468384 EVPLQ92817 2033 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 ZBTB42B2RXF5 422 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 PLD2O14939 933 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 HBP1O60381 514 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 BCAR3O75815 825 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 STAM2O75886 525 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 MBD4O95243 580 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 IFNA2P01563 188 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 PF4P02776 101 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 APPP05067 770 aa5.45□□□□□ -1.54
HMGB1-207ENST00000468384 PRKCBP05771 671 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms