RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 HARS2P49590 506 aaKnown RBP24.04■■□□□ 1.44
PTPN4-208ENST00000460289 MESP2Q0VG99 397 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 SIM2Q14190 667 aaPredicted RBP24.04■■□□□ 1.44
PTPN4-208ENST00000460289 TRIP4Q15650 581 aaPredicted RBP24.04■■□□□ 1.44
PTPN4-208ENST00000460289 GRAMD4Q6IC98 578 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 DENND1CQ8IV53 801 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 SIX2Q9NPC8 291 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 AGO1Q9UL18 857 aaKnown RBP24.04■■□□□ 1.44
PTPN4-208ENST00000460289 MMP17Q9ULZ9 603 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 APBB3O95704 486 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 LTFP02788 710 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 PXNP49023 591 aaPredicted RBP24.03■■□□□ 1.44
PTPN4-208ENST00000460289 PTK2Q05397 1052 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 DENND1BQ6P3S1 775 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 PRR23BQ6ZRT6 265 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 SCUBE3Q8IX30 993 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 TERB1Q8NA31 727 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 MIS12Q9H081 205 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 DNAJC17Q9NVM6 304 aaKnown RBP24.03■■□□□ 1.44
PTPN4-208ENST00000460289 POLR3BQ9NW08 1133 aaPredicted RBP24.03■■□□□ 1.44
PTPN4-208ENST00000460289 ANO10Q9NW15 660 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 EBF1Q9UH73 591 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 SFMBT1Q9UHJ3 866 aa24.03■■□□□ 1.44
PTPN4-208ENST00000460289 HOXC13P31276 330 aa24.02■■□□□ 1.44
PTPN4-208ENST00000460289 TIE1P35590 1138 aa24.02■■□□□ 1.44
PTPN4-208ENST00000460289 KIR2DL1P43626 348 aaPredicted RBP24.02■■□□□ 1.44
PTPN4-208ENST00000460289 CPXM2Q8N436 756 aa24.02■■□□□ 1.44
PTPN4-208ENST00000460289 TSTD1Q8NFU3 115 aa24.02■■□□□ 1.44
PTPN4-208ENST00000460289 HHIPQ96QV1 700 aa24.02■■□□□ 1.44
PTPN4-208ENST00000460289 TRIM62Q9BVG3 475 aa24.02■■□□□ 1.44
PTPN4-208ENST00000460289 SLC4A5Q9BY07 1137 aa24.02■■□□□ 1.44
PTPN4-208ENST00000460289 ACP6Q9NPH0 428 aa24.02■■□□□ 1.44
PTPN4-208ENST00000460289 GMEB2Q9UKD1 530 aa24.02■■□□□ 1.44
PTPN4-208ENST00000460289 AXIN1O15169 862 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 CYBBP04839 570 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 TPM2P07951 284 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 DGKGP49619 791 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 DGKEP52429 567 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 EOGTQ5NDL2 527 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 C10orf76Q5T2E6 689 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 CCDC183Q5T5S1 534 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 EMC10Q5UCC4 262 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 LAIR1Q6GTX8 287 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 MSANTD2Q6P1R3 559 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 CEP68Q76N32 757 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 TRMT11Q7Z4G4 463 aaKnown RBP24.01■■□□□ 1.43
PTPN4-208ENST00000460289 TMEM110Q86TL2 294 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 SFTPA1Q8IWL2 248 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 CCDC33Q8N5R6 958 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 ALLCQ8N6M5 410 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 GPR161Q8N6U8 529 aaKnown RBP24.01■■□□□ 1.43
PTPN4-208ENST00000460289 IL17RCQ8NAC3 791 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 TXNDC5Q8NBS9 432 aaKnown RBP24.01■■□□□ 1.43
PTPN4-208ENST00000460289 CLEC4CQ8WTT0 213 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 STARD13Q9Y3M8 1113 aa24.01■■□□□ 1.43
PTPN4-208ENST00000460289 EP300Q09472 2414 aaPredicted RBP24.01■■□□□ 1.43
PTPN4-208ENST00000460289 WDR87Q6ZQQ6 2873 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 FOXN3O00409 490 aaPredicted RBP24■■□□□ 1.43
PTPN4-208ENST00000460289 KLF8O95600 359 aaPredicted RBP24■■□□□ 1.43
PTPN4-208ENST00000460289 PENKP01210 267 aaPredicted RBP24■■□□□ 1.43
PTPN4-208ENST00000460289 BPIFB4P59827 614 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 KCNMA1Q12791 1236 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 SRSF5Q13243 272 aaKnown RBP24■■□□□ 1.43
PTPN4-208ENST00000460289 CRY1Q16526 586 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 STX1AQ16623 288 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 DCLK2Q8N568 766 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 GAB3Q8WWW8 586 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 BHMTQ93088 406 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 PLK2Q9NYY3 685 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 FBXO10Q9UK96 956 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 PCDHGC3Q9UN70 934 aa24■■□□□ 1.43
PTPN4-208ENST00000460289 ANTXRLA6NF34 631 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 TRIM24O15164 1050 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 RPP40O75818 363 aaKnown RBP23.99■■□□□ 1.43
PTPN4-208ENST00000460289 LATS1O95835 1130 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 NCAM1P13591 858 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 ZNF445P59923 1031 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 KLHDC7AQ5VTJ3 777 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 CDKAL1Q5VV42 579 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 FYB2Q5VWT5 728 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 BEND5Q7L4P6 421 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 UNC45BQ8IWX7 931 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 FAM217AQ8IXS0 508 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 ZNF513Q8N8E2 541 aaPredicted RBP23.99■■□□□ 1.43
PTPN4-208ENST00000460289 FAM149B1Q96BN6 582 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 NOX5Q96PH1 765 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 LHX5Q9H2C1 402 aa23.99■■□□□ 1.43
PTPN4-208ENST00000460289 POLMQ9NP87 494 aaPredicted RBP23.99■■□□□ 1.43
PTPN4-208ENST00000460289 OTOGLQ3ZCN5 2332 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 ALDH1A2O94788 518 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 CISD3P0C7P0 127 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 CLCN1P35523 988 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 KRT9P35527 623 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 SNX16P57768 344 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 PDCLQ13371 301 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 LPAL2Q16609 132 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 NUGGCQ68CJ6 796 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 DPY19L2P1Q6NXN4 242 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 CACNA2D4Q7Z3S7 1137 aa23.98■■□□□ 1.43
PTPN4-208ENST00000460289 FAM71AQ8IYT1 594 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms