RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SNRPNP63162 240 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ASIC1P78348 528 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ZXDBP98169 803 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 MYL7Q01449 175 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 POU5F1Q01860 360 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 CYP27A1Q02318 531 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 C19orf57Q0VDD7 668 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 SMARCB1Q12824 385 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 IFRD2Q12894 506 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 CAMK2GQ13555 558 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 PWP1Q13610 501 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 LRRC32Q14392 662 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 PPP2R5DQ14738 602 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 NFE2Q16621 373 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 TMEM196Q5HYL7 178 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 DGKKQ5KSL6 1271 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 CC2D1AQ6P1N0 951 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 FAM171BQ6P995 826 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 FBXL19Q6PCT2 694 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 BNC2Q6ZN30 1099 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 CEP68Q76N32 757 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 MON1AQ86VX9 555 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 LONP2Q86WA8 852 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 CCDC65Q8IXS2 484 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 GRAMD1CQ8IYS0 662 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ADGRF2Q8IZF7 708 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 TMEM86AQ8N2M4 240 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 TOP6BLQ8N6T0 577 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 FBXO27Q8NI29 283 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ZNF507Q8TCN5 953 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 MRPS31Q92665 395 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 EZH1Q92800 747 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 MYLPFQ96A32 169 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 CCDC127Q96BQ5 260 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 TRIM11Q96F44 468 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 INTS4Q96HW7 963 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ANKRD36BP1Q96IX9 119 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 CHAMP1Q96JM3 812 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ZNF560Q96MR9 790 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 FAM126AQ9BYI3 521 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 RNF38Q9H0F5 515 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ARRDC1-AS1Q9H2J1 176 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 SMOC1Q9H4F8 434 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ZSCAN16Q9H4T2 348 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 TMEM206Q9H813 350 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 SLC39A2Q9NP94 309 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 CRTAC1Q9NQ79 661 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 RXFP3Q9NSD7 469 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 DUS2Q9NX74 493 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 GDAP2Q9NXN4 497 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 OBP2AQ9NY56 170 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 UBP1Q9NZI7 540 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 HSPBP1Q9NZL4 362 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 MAGEC2Q9UBF1 373 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ITGA11Q9UKX5 1188 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 RAB23Q9ULC3 237 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 R3HCC1Q9Y3T6 440 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 WNT6Q9Y6F9 365 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 DNAH14Q0VDD8 3507 aa5.01□□□□□ -1.61
GTF3C3-208ENST00000455546 ASCC3Q8N3C0 2202 aaKnown RBP5□□□□□ -1.61
GTF3C3-208ENST00000455546 KIAA1549LQ6ZVL6 1849 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 TRAV19A0A0A6YYK7 116 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 CLDN5O00501 218 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 TRDMT1O14717 391 aaKnown RBP5□□□□□ -1.61
GTF3C3-208ENST00000455546 DCLK1O15075 740 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 ADAM11O75078 769 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 PPP6R2O75170 966 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 DEAF1O75398 565 aaPredicted RBP5□□□□□ -1.61
GTF3C3-208ENST00000455546 NOL4O94818 638 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 F13A1P00488 732 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 TNNC2P02585 160 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 RETP07949 1114 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 DDX6P26196 483 aaKnown RBP eCLIP5□□□□□ -1.61
GTF3C3-208ENST00000455546 MAOBP27338 520 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 ARNTP27540 789 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 GJA4P35212 333 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 GNL1P36915 607 aaPredicted RBP5□□□□□ -1.61
GTF3C3-208ENST00000455546 SLC6A11P48066 632 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 CASP4P49662 377 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 ARL4DP49703 201 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 CACNA2D1P54289 1103 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 CDH8P55286 799 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 MYL6P60660 151 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 RPL10AP62906 217 aaKnown RBP5□□□□□ -1.61
GTF3C3-208ENST00000455546 GRSF1Q12849 480 aaKnown RBP eCLIP5□□□□□ -1.61
GTF3C3-208ENST00000455546 MYO1EQ12965 1108 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 CUL4BQ13620 913 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 ALCAMQ13740 583 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 PKP1Q13835 747 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 MTF1Q14872 753 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 SETDB1Q15047 1291 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 SF3A2Q15428 464 aaKnown RBP5□□□□□ -1.61
GTF3C3-208ENST00000455546 SNRNP35Q16560 246 aaKnown RBP5□□□□□ -1.61
GTF3C3-208ENST00000455546 DUOXA2Q1HG44 320 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 WDR72Q3MJ13 1102 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 MDH1BQ5I0G3 518 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 EMC10Q5UCC4 262 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 LAIR1Q6GTX8 287 aa5□□□□□ -1.61
GTF3C3-208ENST00000455546 EPM2AIP1Q7L775 607 aaPredicted RBP5□□□□□ -1.61
GTF3C3-208ENST00000455546 TRAPPC11Q7Z392 1133 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms