RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 ALDH1A2O94788 518 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 LETM1O95202 739 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-211ENST00000413354 LATS1O95835 1130 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 LTFP02788 710 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 CYBBP04839 570 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 HMBSP08397 361 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 EEF1GP26641 437 aaKnown RBP16.41■□□□□ 0.22
MCF2L-211ENST00000413354 USP8P40818 1118 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 HARS2P49590 506 aaKnown RBP16.41■□□□□ 0.22
MCF2L-211ENST00000413354 DGKEP52429 567 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 ZNF445P59923 1031 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 KCNJ12Q14500 433 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 TRIP4Q15650 581 aaPredicted RBP16.41■□□□□ 0.22
MCF2L-211ENST00000413354 EOGTQ5NDL2 527 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 MSANTD2Q6P1R3 559 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 CPXM2Q8N436 756 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 STK32AQ8WU08 396 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 ZNF606Q8WXB4 792 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 SHC3Q92529 594 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 NDRG1Q92597 394 aaKnown RBP16.41■□□□□ 0.22
MCF2L-211ENST00000413354 ST7Q9NRC1 585 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 EBF1Q9UH73 591 aa16.41■□□□□ 0.22
MCF2L-211ENST00000413354 ZNF292O60281 2723 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 KLF8O95600 359 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-211ENST00000413354 CALCAP01258 141 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 KLKB1P03952 638 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 TPM2P07951 284 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 TIE1P35590 1138 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 GPD2P43304 727 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 KIR2DL1P43626 348 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-211ENST00000413354 RPL34P49207 117 aaKnown RBP16.4■□□□□ 0.22
MCF2L-211ENST00000413354 DGKGP49619 791 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 MESP2Q0VG99 397 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 C10orf76Q5T2E6 689 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 GJB7Q6PEY0 223 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 SASS6Q6UVJ0 657 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 DENND1CQ8IV53 801 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 CCDC33Q8N5R6 958 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 IL17RCQ8NAC3 791 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 TXNDC5Q8NBS9 432 aaKnown RBP16.4■□□□□ 0.22
MCF2L-211ENST00000413354 ENOX1Q8TC92 643 aaKnown RBP16.4■□□□□ 0.22
MCF2L-211ENST00000413354 EDEM1Q92611 657 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 AGO1Q9UL18 857 aaKnown RBP16.4■□□□□ 0.22
MCF2L-211ENST00000413354 NFE2L3Q9Y4A8 694 aa16.4■□□□□ 0.22
MCF2L-211ENST00000413354 BECN2A8MW95 431 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 PIK3R2O00459 728 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 LRP3O75074 770 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 PENKP01210 267 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-211ENST00000413354 RETP07949 1114 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 PXNP49023 591 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-211ENST00000413354 PTK2Q05397 1052 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 SRSF5Q13243 272 aaKnown RBP16.39■□□□□ 0.21
MCF2L-211ENST00000413354 E2F5Q15329 346 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 CRY1Q16526 586 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 LPAL2Q16609 132 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 HSP90AA4PQ58FG1 418 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 TCP11X2Q5H9J9 407 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 MIIPQ5JXC2 388 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 DENND1BQ6P3S1 775 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 CACNA2D4Q7Z3S7 1137 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 C11orf74Q86VG3 221 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 FAM217AQ8IXS0 508 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 ALLCQ8N6M5 410 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 ZNF513Q8N8E2 541 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-211ENST00000413354 POLMQ9NP87 494 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-211ENST00000413354 SIX2Q9NPC8 291 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 ANO10Q9NW15 660 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 SFMBT1Q9UHJ3 866 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 DNAJC12Q9UKB3 198 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 STARD13Q9Y3M8 1113 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 SDK1Q7Z5N4 2213 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 CFAP54Q96N23 3096 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 PLXND1Q9Y4D7 1925 aa16.39■□□□□ 0.21
MCF2L-211ENST00000413354 CHRM1P11229 460 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-211ENST00000413354 BPIFB4P59827 614 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 STX1AQ16623 288 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 CCDC183Q5T5S1 534 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 NUGGCQ68CJ6 796 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 BEND5Q7L4P6 421 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 SFTPA1Q8IWL2 248 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 UNC45BQ8IWX7 931 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 KIAA2013Q8IYS2 634 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 DCLK2Q8N568 766 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 BHMTQ93088 406 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 FAM149B1Q96BN6 582 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 LOXL4Q96JB6 756 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 SERPINB11Q96P15 392 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 NOX5Q96PH1 765 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 SLC4A5Q9BY07 1137 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 MIS12Q9H081 205 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 SAMSN1Q9NSI8 373 aaKnown RBP16.38■□□□□ 0.21
MCF2L-211ENST00000413354 POLR3BQ9NW08 1133 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-211ENST00000413354 SLC27A6Q9Y2P4 619 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 CEP83Q9Y592 693 aa16.38■□□□□ 0.21
MCF2L-211ENST00000413354 SPTBN4Q9H254 2564 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 THADAQ6YHU6 1953 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 SGK1O00141 431 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 GABBR2O75899 941 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 NCAM1P13591 858 aa16.37■□□□□ 0.21
MCF2L-211ENST00000413354 HOXC13P31276 330 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms