RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 GPR1P46091 355 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 C10orf120Q5SQS8 335 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 BLOC1S5Q8TDH9 187 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 USP27XA6NNY8 438 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 AREL1O15033 823 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 GLP2RO95838 553 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
TPR-201ENST00000367478 GPAT2Q6NUI2 795 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 TRPV3Q8NET8 790 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 USP33Q8TEY7 942 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 GPRC5DQ9NZD1 345 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 PRKAG3Q9UGI9 489 aa12.76□□□□□ -0.37
TPR-201ENST00000367478 RRN3P2A6NIE6 340 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 F5H5T6 163 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 PMPCBO75439 489 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 ITGA4P13612 1032 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 CHPFQ8IZ52 775 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 ZNF184Q99676 751 aaPredicted RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 DSEQ9UL01 958 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 NDUFAF1Q9Y375 327 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 EPHB2P29323 1055 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 RGS7P49802 495 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 CDK7P50613 346 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 TRIM32Q13049 653 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 PDIA6Q15084 440 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 QRICH1Q2TAL8 776 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 SLC13A5Q86YT5 568 aaPredicted RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 GPRASP2Q96D09 838 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 SAR1AQ9NR31 198 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 NAGPAQ9UK23 515 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 GTF3C4Q9UKN8 822 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 ARHGEF40Q8TER5 1519 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 NEDD4P46934 1319 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 FAUP35544 74 aaKnown RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 AGKQ53H12 422 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 MTSS1LQ765P7 747 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 SLC26A11Q86WA9 606 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 PHACTR4Q8IZ21 702 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 MIER2Q8N344 545 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 OR6Y1Q8NGX8 325 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 SERAC1Q96JX3 654 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 SEPT5Q99719 369 aaPredicted RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 RIBC2Q9H4K1 309 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 PRDM8Q9NQV8 689 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 ADCY6O43306 1168 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 TAF13Q15543 124 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 INTS11Q5TA45 600 aaKnown RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 STRA8Q7Z7C7 330 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 DEFB107AQ8IZN7 70 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 ENO2P09104 434 aaPredicted RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 PCNAP12004 261 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 GOLGA7BQ2TAP0 167 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 ADSSL1Q8N142 457 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 PIK3C3Q8NEB9 887 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 TBC1D13Q9NVG8 400 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 SNX8Q9Y5X2 465 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 KBTBD13C9JR72 458 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 NR2C2P49116 596 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 KCNMA1Q12791 1236 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
TPR-201ENST00000367478 LBHD1Q9BQE6 289 aaPredicted RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 SEC31BQ9NQW1 1179 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 CASP1P29466 404 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 DDX39BQ13838 428 aaKnown RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 DHRSXQ8N5I4 330 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 LRRC17Q8N6Y2 441 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 MAGEC3Q8TD91 643 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 EEF1AKMT1Q8WVE0 214 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 TRIT1Q9H3H1 467 aaKnown RBP12.75□□□□□ -0.37
TPR-201ENST00000367478 C8orf4Q9NR00 106 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 TSPOAP1O95153 1857 aa12.75□□□□□ -0.37
TPR-201ENST00000367478 HAT1O14929 419 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 INPP4BO15327 924 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 KPNA6O60684 536 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 BAIAP3O94812 1187 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 HIST1H2ABP04908 130 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 FRG1Q14331 258 aaKnown RBP12.74□□□□□ -0.37
TPR-201ENST00000367478 MAPK11Q15759 364 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 HIST3H2AQ7L7L0 130 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 HIST1H2ACQ93077 130 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 DGCR14Q96DF8 476 aaKnown RBP12.74□□□□□ -0.37
TPR-201ENST00000367478 TMEM216Q9P0N5 145 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 A0A087X0T9 212 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 CDC40O60508 579 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■■□□□ 13.7
TPR-201ENST00000367478 ZC3H11AO75152 810 aaKnown RBP eCLIP12.74□□□□□ -0.374e-7■■■■■ 41.2
TPR-201ENST00000367478 OXCT1P55809 520 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 SPPL2AQ8TCT8 520 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 CROTQ9UKG9 612 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 MGAT4AQ9UM21 535 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 DDHD2O94830 711 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 PRKAR1AP10644 381 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 HOXB8P17481 243 aaPredicted RBP12.74□□□□□ -0.37
TPR-201ENST00000367478 SSTR3P32745 418 aaPredicted RBP12.74□□□□□ -0.37
TPR-201ENST00000367478 ATF7IP2Q5U623 682 aa12.74□□□□□ -0.37
TPR-201ENST00000367478 LRRC34Q8IZ02 419 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms