RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Simc1E9Q6E9 1354 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Arap2Q8BZ05 1703 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm5795E9PZN8 263 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm4841E9QAA8 417 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Neu1O35657 409 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Krt13P08730 437 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ptpn22P29352 802 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 CiitaP79621 1155 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Dcaf17Q3TUL7 519 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Snx21Q3UR97 363 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pla2g4fQ50L41 855 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Klhl14Q69ZK5 630 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ggnbp1Q6K1E7 370 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 NrcamQ810U4 1256 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pnma2Q8BHK0 365 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 DlatQ8BMF4 642 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Serpinb9dQ8BMT0 377 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nrn1lQ8C4W3 162 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 HnmtQ91VF2 295 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Prpf19Q99KP6 504 aaKnown RBP10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Fndc8Q9D2H8 321 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Lrrc71Q9D3W5 558 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 1700080O16RikQ9D9G4 284 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 H2bfmQ9DAB5 224 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Vps35Q9EQH3 796 aaKnown RBP10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 IcoslgQ9JHJ8 322 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Spint1Q9R097 507 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 CpqQ9WVJ3 470 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Rasgrp1Q9Z1S3 795 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Astn1Q61137 1302 aa10.03□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cyp4a12bA2A974 508 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Itih4A6X935 942 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 DgkhD3YXJ0 1156 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Bin2D3Z6Q9 489 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tuft1O08970 390 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Vcam1P29533 739 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mmp13P33435 472 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tfdp1Q08639 410 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ndst1Q3UHN9 882 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Il15raQ60819 263 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 FaddQ61160 205 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pabpc2Q62029 628 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ino80dQ66JY2 873 aaKnown RBP10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tmem132eQ6IEE6 982 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Xpnpep1Q6P1B1 623 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mcph1Q7TT79 822 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tyw1Q8BJM7 721 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ccdc68Q8BVC4 333 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Dnali1Q8BVN8 258 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Slx1bQ8BX32 270 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Atg14Q8CDJ3 492 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cpne5Q8JZW4 593 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Fam83aQ8K2P2 436 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Irak3Q8K4B2 609 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Dusp7Q91Z46 422 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Sike1Q9CPR7 207 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mau2Q9D2X5 619 aaKnown RBP10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Drap1Q9D6N5 205 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ppa1Q9D819 289 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tbc1d21Q9D9D3 336 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tmbim4Q9DA39 238 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Serpinb9bQ9DAV6 377 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Fundc1Q9DB70 155 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Bscl2Q9Z2E9 383 aa10.02□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm5724L7N264 670 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dusp8O09112 663 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sema6aO35464 1031 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Asna1O54984 348 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 DhfrP00375 187 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 ApoeP08226 311 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ftl2P49945 183 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gpc4P51655 557 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Trpv5P69744 723 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Jmjd8Q3TA59 316 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gdpgp1Q3TLS3 386 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Wdr41Q3UDP0 460 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pitpnm3Q3UHE1 974 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tfap2cQ61312 449 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 DaglaQ6WQJ1 1044 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Adgrd1Q80T32 903 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Chst8Q8BQ86 417 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Trim35Q8C006 501 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Usp37Q8C0R0 979 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cfap36Q8C6E0 343 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Plcg2Q8CIH5 1265 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Acvr1cQ8K348 493 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cyp4f13Q99N19 523 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Isl2Q9CXV0 359 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 4933425L06RikQ9D3Z8 585 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tmem206Q9D771 350 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Fxr2Q9WVR4 673 aaKnown RBP10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rps6ka4Q9Z2B9 773 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pcna-ps2A0A140T8V5 261 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 A0A1L1ST33 502 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Krt24A1L317 512 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Osbpl7A2A716 963 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 GabreA2AMW3 916 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc16a6B1AT66 607 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr611K7N609 323 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr612L7N462 323 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms