RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Irak4Q8R4K2 459 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Vangl2Q91ZD4 521 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Clvs1Q9D4C9 354 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Hormad1Q9D5T7 392 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Rps6kb2Q9Z1M4 485 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 4931406B18RikA2RSL7 367 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Orm2P07361 207 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Siah1aP61092 282 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 PoliQ6R3M4 717 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Znf445Q8R2V3 986 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Klhl28Q9CR40 571 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Pfdn1Q9CWM4 122 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Lima1Q9ERG0 753 aaKnown RBP19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Ropn1Q9ESG2 212 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Trip4Q9QXN3 581 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Morc1Q9WVL5 950 aa19■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Adgra3Q7TT36 1310 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Gm28168A0A087WNP1 180 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Rpl5P47962 297 aaKnown RBP18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Tgfbrap1Q3UR70 860 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Gstt1Q64471 240 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Olfr1057Q7TR75 315 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Slitrk1Q810C1 696 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Washc5Q8C2E7 1159 aaKnown RBP18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Dennd1aQ8K382 1016 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Q9D2Q3 444 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Q9D937 123 aaKnown RBP18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Dennd5bA2RSQ0 1274 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 FancfE9Q5Z5 343 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Acot1O55137 419 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Rpl22P67984 128 aaKnown RBP18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Skint6A7XUZ6 1240 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Gm7694J3QNH8 270 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Nek2O35942 443 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 PdgfaP20033 211 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Drg1P32233 367 aaKnown RBP18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Proser1Q5PRE5 913 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Txndc8Q69AB2 127 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Iars2Q8BIJ6 1012 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Pgm5Q8BZF8 567 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Pacsin3Q99JB8 424 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Kdelr1Q99JH8 212 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Psma4Q9R1P0 261 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Fam205a1D3YZF6 1314 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Ccdc120A2AEV7 629 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Erich1E9PY43 332 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 AfpP02772 605 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Csn1s1P19228 313 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 NrlP54846 237 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Meis2P97367 477 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 AurkaP97477 395 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Ak8Q32M07 479 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Cul4aQ3TCH7 759 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Zfp217Q3U0X6 1041 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Plcl1Q3USB7 1096 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 P3h1Q3V1T4 739 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Lrrc47Q505F5 581 aaKnown RBP18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Bcap31Q61335 245 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Olfr301Q7TS04 311 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 IntS13Q8QZV7 732 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Exd2Q8VEG4 650 aaKnown RBP18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Serpinb9bQ9DAV6 377 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Pidd1Q9ERV7 915 aa18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Map3k20Q9ESL4 802 aaKnown RBP18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Nup153E9Q3G8 1462 aaKnown RBP18.99■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Gm15448F6PZL4 682 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Hk2O08528 917 aaKnown RBP18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 FaahO08914 579 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Afg1lQ3V384 480 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Olfr8Q60892 310 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Ppme1Q8BVQ5 386 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 TrabdQ99JY4 376 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Rex1bdQ9CYZ6 169 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Hsd3b7Q9EQC1 369 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 1700031M16RikA0A087WSH0 82 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Glud1P26443 558 aaKnown RBP18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 GemP55041 295 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Pih1d3Q3KNI6 218 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Ubxn7Q6P5G6 467 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 TbcdQ8BYA0 1196 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 DolkQ8R2Y3 534 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Gtf2a1lQ8R4I4 468 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Snap47Q8R570 413 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Cox18Q8VC74 331 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 MyocdQ8VIM5 935 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Lgr5Q9Z1P4 907 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 AtrnQ9WU60 1428 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Prox1P48437 737 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 GpamQ61586 827 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Trmt11Q9CWH5 460 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Brat1Q8C3R1 822 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Rpp40Q8R1F9 363 aa18.98■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Smok3cA0A087WSF2 504 aa18.97■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Usp17ldG5E8G2 545 aa18.97■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Usp17lcG5E8I7 545 aa18.97■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Ccr1P51675 355 aa18.97■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Mapre1Q61166 268 aaKnown RBP18.97■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Cdk5rap2Q8K389 1822 aa18.97■□□□□ 0.63
Ebf3-201ENSMUST00000033378 Gsg1l2M0QWL6 290 aa18.97■□□□□ 0.63
Ebf3-201ENSMUST00000033378 ClockO08785 855 aa18.97■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms