RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 CST5P28325 142 aaPredicted RBP6.69□□□□□ -1.34
LRRC28-220ENST00000561253 ECHS1P30084 290 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 CCND2P30279 289 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 WASP42768 502 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 TOB1P50616 345 aaPredicted RBP6.69□□□□□ -1.34
LRRC28-220ENST00000561253 WNT3AP56704 352 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 ARHGAP1Q07960 439 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 NFYCQ13952 458 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 MINDY4Q4G0A6 757 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 DUSP28Q4G0W2 176 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 CEP55Q53EZ4 464 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 CCDC181Q5TID7 509 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 MOXD1Q6UVY6 613 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 NIPA1Q7RTP0 329 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 C14orf80Q86SX3 495 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 C1QL4Q86Z23 238 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 HSCBQ8IWL3 235 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 KLHDC9Q8NEP7 349 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 BICD2Q8TD16 824 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 TBCKQ8TEA7 893 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 ZNF480Q8WV37 535 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 HDAC10Q969S8 669 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 C8orf48Q96LL4 319 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 C7orf25Q9BPX7 421 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 MXRA8Q9BRK3 442 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 FOXP1Q9H334 677 aaPredicted RBP6.69□□□□□ -1.34
LRRC28-220ENST00000561253 ING3Q9NXR8 418 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 DDX20Q9UHI6 824 aaKnown RBP6.69□□□□□ -1.34
LRRC28-220ENST00000561253 ZHX1Q9UKY1 873 aaPredicted RBP6.69□□□□□ -1.34
LRRC28-220ENST00000561253 SMC3Q9UQE7 1217 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 CNPY2Q9Y2B0 182 aa6.69□□□□□ -1.34
LRRC28-220ENST00000561253 MYH7BA7E2Y1 1941 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 MTSS1O43312 755 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 HTRA2O43464 458 aaPredicted RBP6.68□□□□□ -1.34
LRRC28-220ENST00000561253 SLC37A4O43826 429 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 DUSP11O75319 330 aaKnown RBP6.68□□□□□ -1.34
LRRC28-220ENST00000561253 SGPL1O95470 568 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 TDP2O95551 362 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 ZSCAN22P10073 491 aaPredicted RBP6.68□□□□□ -1.34
LRRC28-220ENST00000561253 ARP10275 920 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 TGFB3P10600 412 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 XBP1P17861 261 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 BMP7P18075 431 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 KRT2P35908 639 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 PER3P56645 1201 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 RAC3P60763 192 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 HGFACQ04756 655 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 DUSP2Q05923 314 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 RESTQ13127 1097 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 ITGB3BPQ13352 177 aaPredicted RBP6.68□□□□□ -1.34
LRRC28-220ENST00000561253 PKP1Q13835 747 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 SURF1Q15526 300 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 Q4G0T1 1027 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 PPP4R3AQ6IN85 833 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 ARHGEF18Q6ZSZ5 1173 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 PIK3AP1Q6ZUJ8 805 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 ZDHHC14Q8IZN3 488 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 C4orf32Q8N8J7 132 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 SYT8Q8NBV8 401 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 ETNPPLQ8TBG4 499 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 U2AF1L4Q8WU68 220 aaKnown RBP6.68□□□□□ -1.34
LRRC28-220ENST00000561253 SCFD2Q8WU76 684 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 RPL10LQ96L21 214 aaKnown RBP6.68□□□□□ -1.34
LRRC28-220ENST00000561253 DEFB118Q96PH6 123 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 UHRF1Q96T88 793 aaPredicted RBP6.68□□□□□ -1.34
LRRC28-220ENST00000561253 SENP7Q9BQF6 1050 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 WDR11Q9BZH6 1224 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 KCNMB3Q9NPA1 279 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 RTEL1Q9NZ71 1219 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 NCDNQ9UBB6 729 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 Q9Y3F1 56 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 SYNRGQ9UMZ2 1314 aa6.68□□□□□ -1.34
LRRC28-220ENST00000561253 NRP1O14786 923 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 MSH4O15457 936 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 FIBPO43427 364 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 AP1G1O43747 822 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 ENDOD1O94919 500 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 PGK1P00558 417 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 MYCLP12524 364 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-220ENST00000561253 PDCP20941 246 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 LPOP22079 712 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-220ENST00000561253 TNFAIP2Q03169 654 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 ACAP1Q15027 740 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 NONOQ15233 471 aaKnown RBP eCLIP6.67□□□□□ -1.34
LRRC28-220ENST00000561253 LY6KQ17RY6 165 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 MST1LQ2TV78 715 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 GFOD2Q3B7J2 385 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 C3orf36Q3SXR2 165 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 GAGE13Q4V321 117 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 ANO1Q5XXA6 986 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 METTL7BQ6UX53 244 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 SEPT14Q6ZU15 432 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 EPM2AIP1Q7L775 607 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-220ENST00000561253 NEK8Q86SG6 692 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 RHOT1Q8IXI2 618 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 FAM184AQ8NB25 1140 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 TTC8Q8TAM2 541 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 RABGGTAQ92696 567 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 HAS1Q92839 578 aa6.67□□□□□ -1.34
LRRC28-220ENST00000561253 MTMR9Q96QG7 549 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms