RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 NXPE4Q6UWF7 544 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 KIAA1324Q6UXG2 1013 aaKnown RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 USP53Q70EK8 1073 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 ADAT2Q7Z6V5 191 aaKnown RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 GALNT12Q8IXK2 581 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 ARL14EPQ8N8R7 260 aaPredicted RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 DCBLD1Q8N8Z6 715 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 SPATA20Q8TB22 786 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 RFFLQ8WZ73 363 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 C18orf25Q96B23 403 aaPredicted RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 GRAMD1AQ96CP6 724 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 OTUB2Q96DC9 234 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 MRGPRX1Q96LB2 322 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 MYRFLQ96LU7 910 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 ZMAT2Q96NC0 199 aaKnown RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 HSD17B14Q9BPX1 270 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 ZCWPW1Q9H0M4 648 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 POLR1BQ9H9Y6 1135 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 ZDHHC3Q9NYG2 299 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 HSPBP1Q9NZL4 362 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 EHD2Q9NZN4 543 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 CNTN3Q9P232 1028 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 WRAP73Q9P2S5 460 aaPredicted RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 KCNG1Q9UIX4 513 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 RCAN3Q9UKA8 241 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 PCDHB5Q9Y5E4 795 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 SNX11Q9Y5W9 270 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 LRRK2Q5S007 2527 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 PTPRBP23467 1997 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 EML5Q05BV3 1969 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 POLQO75417 2590 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 A0A1W2PQF6 199 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 BLACEA4D250 179 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 CLEC18AA5D8T8 446 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 RNF223E7ERA6 249 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 H0Y8X5 98 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 KCNK3O14649 394 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 NPC1O15118 1278 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 SYNCRIPO60506 623 aaKnown RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 DNAJC6O75061 913 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 PPFIA2O75334 1257 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 TDP2O95551 362 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 MCF2P10911 925 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 ADH5P11766 374 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 KRT10P13645 584 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 GCFC2P16383 781 aaKnown RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 ATF6P18850 670 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 LRPAP1P30533 357 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 WASP42768 502 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 PTGIRP43119 386 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 PPP3CCP48454 512 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 ARRB1P49407 418 aaPredicted RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 AARSP49588 968 aaKnown RBP eCLIP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 RARRES1P49788 294 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 LILRA4P59901 499 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 ATP2C1P98194 919 aaPredicted RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 GRIN1Q05586 938 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 C10orf76Q5T2E6 689 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 C20orf194Q5TEA3 1177 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 NT5DC1Q5TFE4 455 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 NCAPH2Q6IBW4 605 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 CLEC18BQ6UXF7 455 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 Q6ZVU0 165 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 FILIP1Q7Z7B0 1213 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 DDX42Q86XP3 938 aaKnown RBP eCLIP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 CLEC18CQ8NCF0 446 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 SCFD1Q8WVM8 642 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 HPS3Q969F9 1004 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 TRMT2BQ96GJ1 504 aaKnown RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 SENP8Q96LD8 212 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 TMEM74Q96NL1 305 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 CCNL2Q96S94 520 aaPredicted RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 SRPK1Q96SB4 655 aaKnown RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 EIF2AK1Q9BQI3 630 aaKnown RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 NT5C1AQ9BXI3 368 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 MRPL4Q9BYD3 311 aaKnown RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 TRPM5Q9NZQ8 1165 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 GCNT4Q9P109 453 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 PLEKHB1Q9UF11 243 aaPredicted RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 VAV3Q9UKW4 847 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 PPM1HQ9ULR3 514 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 NAP1L2Q9ULW6 460 aaPredicted RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 UBQLN1Q9UMX0 589 aaKnown RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 PCDHA4Q9UN74 947 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 PCDHA12Q9UN75 941 aa5.53□□□□□ -1.52
CKAP4-203ENST00000553039 PDCD11Q14690 1871 aaKnown RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 USP9YO00507 2555 aaPredicted RBP5.53□□□□□ -1.52
CKAP4-203ENST00000553039 ITPR3Q14573 2671 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 A0A1B0GTQ1 180 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ANTXRLA6NF34 631 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 BTBD18B2RXH4 712 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 LEFTY2O00292 366 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 USO1O60763 962 aaKnown RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 PHACTR2O75167 634 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 CYP17A1P05093 508 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ITGB6P18564 788 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 CYP11B2P19099 503 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 POU3F2P20265 443 aaPredicted RBP5.52□□□□□ -1.53
CKAP4-203ENST00000553039 ETFBP38117 255 aa5.52□□□□□ -1.53
CKAP4-203ENST00000553039 EIF4A3P38919 411 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms