RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 APOBEC2Q9Y235 224 aaKnown RBP8.6□□□□□ -1.03
CLPB-211ENST00000542555 STK36Q9NRP7 1315 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 UPK3BL1B0FP48 263 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 UPK3BL2E5RIL1 263 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 CLDN3O15551 220 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 RNGTTO60942 597 aaKnown RBP8.59□□□□□ -1.03
CLPB-211ENST00000542555 FAM13AO94988 1023 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 CEACAM5P06731 702 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 CYP3A5P20815 502 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 CFPP27918 469 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 GJA4P35212 333 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 HOXD12P35452 270 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 CCT6AP40227 531 aaKnown RBP8.59□□□□□ -1.03
CLPB-211ENST00000542555 SCAPQ12770 1279 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 NOLC1Q14978 699 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLPB-211ENST00000542555 SAFBQ15424 915 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLPB-211ENST00000542555 DUOXA1Q1HG43 343 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 SPDYCQ5MJ68 293 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 LYSMD4Q5XG99 296 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 TRIM68Q6AZZ1 485 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 ARMCX6Q7L4S7 300 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 SMYD4Q8IYR2 804 aaPredicted RBP8.59□□□□□ -1.03
CLPB-211ENST00000542555 DCP1BQ8IZD4 617 aaKnown RBP8.59□□□□□ -1.03
CLPB-211ENST00000542555 SPPL2BQ8TCT7 592 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 GIPC2Q8TF65 315 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 CHFRQ96EP1 664 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 TSPAN18Q96SJ8 248 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 TCF12Q99081 682 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 KIF2CQ99661 725 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 RAB34Q9BZG1 259 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 ECT2Q9H8V3 914 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 HPS4Q9NQG7 708 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 PDRG1Q9NUG6 133 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 ORC3Q9UBD5 711 aaPredicted RBP8.59□□□□□ -1.03
CLPB-211ENST00000542555 MAGED2Q9UNF1 606 aaPredicted RBP8.59□□□□□ -1.03
CLPB-211ENST00000542555 CFAP47Q6ZTR5 3102 aa8.59□□□□□ -1.03
CLPB-211ENST00000542555 SPAG17Q6Q759 2223 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 FAM221BA6H8Z2 402 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 MYMKA6NI61 221 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 AP5Z1O43299 807 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 MED24O75448 989 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 TOM1L1O75674 476 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 SOAT2O75908 522 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 NFATC1O95644 943 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 CKMP06732 381 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 CLTAP09496 248 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 USP17L7P0C7H9 530 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 CSH1P0DML2 217 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 CSH2P0DML3 217 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 ARSAP15289 507 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 U2AF2P26368 475 aaKnown RBP eCLIP8.58□□□□□ -1.04
CLPB-211ENST00000542555 LRPAP1P30533 357 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 MCM7P33993 719 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 PDE6CP51160 858 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 MRPS21P82921 87 aaKnown RBP8.58□□□□□ -1.04
CLPB-211ENST00000542555 SEMA3BQ13214 749 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 ZNF268Q14587 947 aaPredicted RBP8.58□□□□□ -1.04
CLPB-211ENST00000542555 MTF1Q14872 753 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 SLC39A12Q504Y0 691 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 C2orf27AQ580R0 203 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 EOGTQ5NDL2 527 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 SLC36A4Q6YBV0 504 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 MON1AQ86VX9 555 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 LRRC56Q8IYG6 542 aaPredicted RBP8.58□□□□□ -1.04
CLPB-211ENST00000542555 FSIP1Q8NA03 581 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 HNRNPLLQ8WVV9 542 aaKnown RBP8.58□□□□□ -1.04
CLPB-211ENST00000542555 USP13Q92995 863 aaPredicted RBP8.58□□□□□ -1.04
CLPB-211ENST00000542555 BICD1Q96G01 975 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 LRIG1Q96JA1 1093 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 BHMT2Q9H2M3 363 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 C17orf75Q9HAS0 396 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 POLR3BQ9NW08 1133 aaPredicted RBP8.58□□□□□ -1.04
CLPB-211ENST00000542555 CRIM1Q9NZV1 1036 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 TUBGCP4Q9UGJ1 667 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 DNM3Q9UQ16 869 aa8.58□□□□□ -1.04
CLPB-211ENST00000542555 PKD1L2Q7Z442 2459 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 TRAV19A0A0A6YYK7 116 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 H0YCG3 227 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 TMPRSS2O15393 492 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 TSPAN15O95858 294 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 EDN1P05305 212 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 ITIH2P19823 946 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 NPTX2P47972 431 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 RPL10AP62906 217 aaKnown RBP8.57□□□□□ -1.04
CLPB-211ENST00000542555 TSPY1Q01534 308 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 ID3Q02535 119 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 FAM160A1Q05DH4 1040 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 SLC14A1Q13336 389 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 GNL2Q13823 731 aaKnown RBP8.57□□□□□ -1.04
CLPB-211ENST00000542555 TOB2Q14106 344 aaPredicted RBP8.57□□□□□ -1.04
CLPB-211ENST00000542555 TRIP6Q15654 476 aaKnown RBP8.57□□□□□ -1.04
CLPB-211ENST00000542555 CRY1Q16526 586 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 SLC10A6Q3KNW5 377 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 HSF5Q4G112 596 aaPredicted RBP8.57□□□□□ -1.04
CLPB-211ENST00000542555 PREPLQ4J6C6 727 aaPredicted RBP8.57□□□□□ -1.04
CLPB-211ENST00000542555 PIP4P1Q86T03 277 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 RASSF3Q86WH2 238 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 CD302Q8IX05 232 aa8.57□□□□□ -1.04
CLPB-211ENST00000542555 GALNT12Q8IXK2 581 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms