RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 DENND1BQ6P3S1 775 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 NAT16Q8N8M0 369 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 ZBTB44Q8NCP5 570 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 ATRIPQ8WXE1 791 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 SHC3Q92529 594 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 EDEM1Q92611 657 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 CNGB3Q9NQW8 809 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 ANO10Q9NW15 660 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 TAB2Q9NYJ8 693 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 MARCH2Q9P0N8 246 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 DNAJC12Q9UKB3 198 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 PCDHGA2Q9Y5H1 932 aa15.53■□□□□ 0.08
LIMS4-201ENST00000413601 ANTXRLA6NF34 631 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 K7EQS6 105 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 K7ESF4 209 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 MED7O43513 233 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 ABCB7O75027 752 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 ATG13O75143 517 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 KLKB1P03952 638 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 EEF1GP26641 437 aaKnown RBP15.52■□□□□ 0.08
LIMS4-201ENST00000413601 GPD2P43304 727 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 NRLP54845 237 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 COG7P83436 770 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 KDSRQ06136 332 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 DMWDQ09019 674 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 KCNMA1Q12791 1236 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 STX1AQ16623 288 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 FBXO43Q4G163 708 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 CDKAL1Q5VV42 579 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 DPY19L2P1Q6NXN4 242 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 Q6ZNB5 142 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 TPGS1Q6ZTW0 290 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 SFTPA1Q8IWL2 248 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 SCML4Q8N228 414 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 RPLP0P6Q8NHW5 317 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 CLEC4CQ8WTT0 213 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 HSFY1Q96LI6 401 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 PNKPQ96T60 521 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 FAM126AQ9BYI3 521 aaPredicted RBP15.52■□□□□ 0.08
LIMS4-201ENST00000413601 SEMA4AQ9H3S1 761 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.08
LIMS4-201ENST00000413601 TMEM63CQ9P1W3 806 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 STRIP2Q9ULQ0 834 aa15.52■□□□□ 0.08
LIMS4-201ENST00000413601 SLC12A8A0AV02 714 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 FOXN3O00409 490 aaPredicted RBP15.51■□□□□ 0.07
LIMS4-201ENST00000413601 HOXC11O43248 304 aaPredicted RBP15.51■□□□□ 0.07
LIMS4-201ENST00000413601 PAPSS2O95340 614 aaPredicted RBP15.51■□□□□ 0.07
LIMS4-201ENST00000413601 CORO1AP31146 461 aaKnown RBP15.51■□□□□ 0.07
LIMS4-201ENST00000413601 SEC13P55735 322 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 HEATR6Q6AI08 1181 aaKnown RBP15.51■□□□□ 0.07
LIMS4-201ENST00000413601 FMNL3Q8IVF7 1028 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 RNF139Q8WU17 664 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 MIS12Q9H081 205 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 VPS16Q9H269 839 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 ST7Q9NRC1 585 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 ABCC13Q9NSE7 274 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 OLA1Q9NTK5 396 aaKnown RBP15.51■□□□□ 0.07
LIMS4-201ENST00000413601 FANCLQ9NW38 375 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 SFMBT1Q9UHJ3 866 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 MYO15AQ9UKN7 3530 aa15.51■□□□□ 0.07
LIMS4-201ENST00000413601 VPS13AQ96RL7 3174 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 CHURC1-FNTBB4DL54 471 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 NEDD8-MDP1E9PL57 170 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 LILRB5O75023 590 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 TULP3O75386 442 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 KAT7O95251 611 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 LMNAP02545 664 aaKnown RBP15.5■□□□□ 0.07
LIMS4-201ENST00000413601 APODP05090 189 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 PNMA6AP0CW24 399 aaPredicted RBP15.5■□□□□ 0.07
LIMS4-201ENST00000413601 EIF2DP41214 584 aaKnown RBP15.5■□□□□ 0.07
LIMS4-201ENST00000413601 RPL34P49207 117 aaKnown RBP15.5■□□□□ 0.07
LIMS4-201ENST00000413601 FNTBP49356 437 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 KRT31Q15323 416 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 C2orf27AQ580R0 203 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 DENND1CQ8IV53 801 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 SCUBE3Q8IX30 993 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 ETFBKMTQ8IXQ9 262 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 IRGQQ8WZA9 623 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 BBS2Q9BXC9 721 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 DCLK3Q9C098 648 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 ARHGEF4Q9NR80 690 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 CYTH4Q9UIA0 394 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 SLC8A2Q9UPR5 921 aa15.5■□□□□ 0.07
LIMS4-201ENST00000413601 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.49■□□□□ 0.07
LIMS4-201ENST00000413601 TRIM24O15164 1050 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 FBXO21O94952 628 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 LTFP02788 710 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 TYRP14679 529 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 CLCN1P35523 988 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 PXNP49023 591 aaPredicted RBP15.49■□□□□ 0.07
LIMS4-201ENST00000413601 PTK2Q05397 1052 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 RAPGEF1Q13905 1077 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 MEA1Q16626 185 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 EMC10Q5UCC4 262 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 KLHDC7AQ5VTJ3 777 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 PHTF2Q8N3S3 785 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 SUMF1Q8NBK3 374 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 USP33Q8TEY7 942 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 BHMTQ93088 406 aa15.49■□□□□ 0.07
LIMS4-201ENST00000413601 LSM14BQ9BX40 385 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms