RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 ARHGAP21Q5T5U3 1957 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 CNTNAP2Q9UHC6 1331 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 PDHXO00330 501 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 TSPAN3O60637 253 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 DDHD2O94830 711 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 SUPT7LO94864 414 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 GJB1P08034 283 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ACAT1P24752 427 aaKnown RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 STIP1P31948 543 aaKnown RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 SCTRP47872 440 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 FNTAP49354 379 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ST8SIA6P61647 398 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 TGFB2P61812 414 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 PLOD1Q02809 727 aaPredicted RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 MAPRE1Q15691 268 aaKnown RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 GRIK4Q16099 956 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 UGP2Q16851 508 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 CREG2Q8IUH2 290 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ARHGEF19Q8IW93 802 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 CCDC60Q8IWA6 550 aaPredicted RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 NAF1Q96HR8 494 aaKnown RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 NSL1Q96IY1 281 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 FAM96AQ9H5X1 160 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ENTPD7Q9NQZ7 604 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 TAS2R14Q9NYV8 317 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 LSM7Q9UK45 103 aaKnown RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 SNX5Q9Y5X3 404 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 TOGARAM1Q9Y4F4 1720 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ROS1P08922 2347 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 LAMA2P24043 3122 aaKnown RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 ALS2Q96Q42 1657 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 C2orf81A6NN90 581 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 HNRNPCL2B2RXH8 293 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 TPST1O60507 370 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 HNRNPCL1O60812 293 aaKnown RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 KLHL2O95198 593 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 GUCA1CO95843 209 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 JCHAINP01591 159 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ALDH2P05091 517 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 CKMP06732 381 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 RARGP13631 454 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 HLA-DPA1P20036 260 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 OR1E1P30953 314 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 PNPLA4P41247 253 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 RGS4P49798 205 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 SERPINB9P50453 376 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 CENPCQ03188 943 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 PTPN11Q06124 597 aaPredicted RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 ZNF177Q13360 481 aaPredicted RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 RASA2Q15283 850 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 TCEA2Q15560 299 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 GRAMD4Q6IC98 578 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 TMEM154Q6P9G4 183 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 METTL7BQ6UX53 244 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 NUDT18Q6ZVK8 323 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 NT5DC3Q86UY8 548 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 KCTD17Q8N5Z5 321 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 SNX31Q8N9S9 440 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 FBXO36Q8NEA4 188 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 CNDP1Q96KN2 507 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 DACH2Q96NX9 599 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 CINPQ9BW66 212 aaPredicted RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 GPATCH2LQ9NWQ4 482 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 GTF3C4Q9UKN8 822 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 MYO1GB0I1T2 1018 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ADCY3O60266 1144 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 MYO1DO94832 1006 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ZSCAN5DPP0CG00 497 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 GHRP10912 638 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 IFNA8P32881 189 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 NR2C2P49116 596 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 ERVK-9P63128 1117 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 POU4F1Q01851 419 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 EFEMP1Q12805 493 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 FLOT2Q14254 428 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 FIGNQ5HY92 759 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 MAP1SQ66K74 1059 aaPredicted RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 CAPRIN2Q6IMN6 1127 aaKnown RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 WDR49Q8IV35 697 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 SLC44A2Q8IWA5 706 aaPredicted RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 USP6NLQ92738 828 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 TLR10Q9BXR5 811 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 GLIS2Q9BZE0 524 aaPredicted RBP3.36□□□□□ -1.87
KNL1-202ENST00000399668 FOXP3Q9BZS1 431 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 NAALADL1Q9UQQ1 740 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 HES2Q9Y543 173 aa3.36□□□□□ -1.87
KNL1-202ENST00000399668 A0A0A6YYK5 440 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 ENO4A6NNW6 628 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 ERI2A8K979 691 aaKnown RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 DDX3XO00571 662 aaKnown RBP eCLIP3.35□□□□□ -1.872e-9■■■□□ 16.8
KNL1-202ENST00000399668 MTSS1O43312 755 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 USP12O75317 370 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 UBOX5O94941 541 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 MT-CO1P00395 513 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 LRG1P02750 347 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 OCM2P0CE71 109 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 OCMP0CE72 109 aaPredicted RBP3.35□□□□□ -1.87
KNL1-202ENST00000399668 ITGB6P18564 788 aa3.35□□□□□ -1.87
KNL1-202ENST00000399668 TFE3P19532 575 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms