RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 DDX5P17844 614 aaKnown RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 DRG2P55039 364 aaKnown RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 GTF2H3Q13889 308 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 SNX17Q15036 470 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 CCL15Q16663 113 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 SYTL3Q4VX76 610 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 ZBTB49Q6ZSB9 765 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 IRF2BP1Q8IU81 584 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 KATNAL2Q8IYT4 538 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 ADGRF2Q8IZF7 708 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 POU5F2Q8N7G0 328 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 DYRK4Q9NR20 520 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 IL1RAPL1Q9NZN1 696 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 PCYOX1Q9UHG3 505 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 AP4S1Q9Y587 144 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 ASMTLO95671 621 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 MT-CO1P00395 513 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 CYP3A4P08684 503 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 EIF4BP23588 611 aaKnown RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 HOXD10P28358 340 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 MIPP30301 263 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 PBX1P40424 430 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 NME5P56597 212 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 ELF3P78545 371 aaPredicted RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 BST2Q10589 180 aaKnown RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 CSHL1Q14406 222 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 CNGA2Q16280 664 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 ATP6V0D2Q8N8Y2 350 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 STK32AQ8WU08 396 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 WNT7AO00755 349 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 TRIM13O60858 407 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 USP1O94782 785 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 TGFB3P10600 412 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 SLC1A6P48664 564 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 CHRNB3Q05901 458 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 AGKQ53H12 422 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 FBXO47Q5MNV8 452 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 TMEM139Q8IV31 216 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 CCDC60Q8IWA6 550 aaPredicted RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 BRSK2Q8IWQ3 736 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 STKLD1Q8NE28 680 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 KAT2BQ92831 832 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 IDI2Q9BXS1 227 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 SPDYE5A6NIY4 337 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 SRRM3A6NNA2 597 aaPredicted RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 NCAM2O15394 837 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 ODC1P11926 461 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 SPDYE7PQ495Y7 208 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 NBPF12Q5TAG4 269 aaPredicted RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 GPR141Q7Z602 305 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 FAM83AQ86UY5 434 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 SNX31Q8N9S9 440 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 LNX1Q8TBB1 728 aaPredicted RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 KIAA1683Q9H0B3 1180 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 SAR1AQ9NR31 198 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 APPL1Q9UKG1 709 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 RNF112Q9ULX5 631 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 PCDHB8Q9UN66 801 aa14.15□□□□□ -0.14
RTN4-202ENST00000337526 DRG1Q9Y295 367 aaKnown RBP14.15□□□□□ -0.14
RTN4-202ENST00000337526 KANSL1LA0AUZ9 987 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 C2orf81A6NN90 581 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 APOC4-APOC2K7ER74 178 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 APOC2P02655 101 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 NUP107P57740 925 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 RUNX1T1Q06455 604 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 ARHGEF7Q14155 803 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 TJAP1Q5JTD0 557 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 HORMAD1Q86X24 394 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 NMD3Q96D46 503 aaKnown RBP14.14□□□□□ -0.15
RTN4-202ENST00000337526 PIH1D1Q9NWS0 290 aaKnown RBP14.14□□□□□ -0.15
RTN4-202ENST00000337526 CRLS1Q9UJA2 301 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 KRT8P05787 483 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 YY1P25490 414 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 OASLQ15646 514 aaKnown RBP14.14□□□□□ -0.15
RTN4-202ENST00000337526 TIGD7Q6NT04 549 aaPredicted RBP14.14□□□□□ -0.15
RTN4-202ENST00000337526 ZFPM1Q8IX07 1006 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 TNIP2Q8NFZ5 429 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 SNRNP27Q8WVK2 155 aaKnown RBP14.14□□□□□ -0.15
RTN4-202ENST00000337526 PIDD1Q9HB75 910 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 ATP11BQ9Y2G3 1177 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 KCNK1O00180 336 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 CSE1LP55060 971 aaKnown RBP14.14□□□□□ -0.15
RTN4-202ENST00000337526 MAP3K7CLP57077 242 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 TRIM60Q495X7 471 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 PKN3Q6P5Z2 889 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 SCUBE3Q8IX30 993 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 HTR3CQ8WXA8 447 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 PRDM5Q9NQX1 630 aaPredicted RBP14.14□□□□□ -0.15
RTN4-202ENST00000337526 ASTN1O14525 1302 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 BCL9O00512 1426 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 MAGEB16A2A368 324 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 UBDO15205 165 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 FBXO21O94952 628 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 WDR47O94967 919 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 ALDH1A1P00352 501 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 TMED10P49755 219 aaKnown RBP14.14□□□□□ -0.15
RTN4-202ENST00000337526 PRKAA1Q13131 559 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 CCDC81Q6ZN84 652 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 IRF2BP2Q7Z5L9 587 aa14.14□□□□□ -0.15
RTN4-202ENST00000337526 HS6ST3Q8IZP7 471 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms