RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 TBCCD1Q9NVR7 557 aa7.09□□□□□ -1.27
CLCN3-211ENST00000613795 THAP1Q9NVV9 213 aa7.09□□□□□ -1.27
CLCN3-211ENST00000613795 CRNNQ9UBG3 495 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-211ENST00000613795 DUSP10Q9Y6W6 482 aa7.09□□□□□ -1.27
CLCN3-211ENST00000613795 FLT1P17948 1338 aa7.09□□□□□ -1.27
CLCN3-211ENST00000613795 RGS20O76081 388 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 POLBP06746 335 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 PSMB9P28065 219 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 ITGA1P56199 1179 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 IFI35P80217 286 aaPredicted RBP7.09□□□□□ -1.28
CLCN3-211ENST00000613795 SREBF2Q12772 1141 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 TSTA3Q13630 321 aaPredicted RBP7.09□□□□□ -1.28
CLCN3-211ENST00000613795 NKX1-1Q15270 411 aaPredicted RBP7.09□□□□□ -1.28
CLCN3-211ENST00000613795 MAPRE1Q15691 268 aaKnown RBP7.09□□□□□ -1.28
CLCN3-211ENST00000613795 PKN2Q16513 984 aaKnown RBP7.09□□□□□ -1.28
CLCN3-211ENST00000613795 CDO1Q16878 200 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 ARHGAP17Q68EM7 881 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 C11orf63Q6NUN7 778 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 KLHL17Q6TDP4 642 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 SLC25A41Q8N5S1 370 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 DQX1Q8TE96 717 aaKnown RBP7.09□□□□□ -1.28
CLCN3-211ENST00000613795 HDAC7Q8WUI4 952 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 USP13Q92995 863 aaPredicted RBP7.09□□□□□ -1.28
CLCN3-211ENST00000613795 APOPT1Q96IL0 206 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 C17orf80Q9BSJ5 609 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 TRNAU1APQ9NX07 287 aaKnown RBP7.09□□□□□ -1.28
CLCN3-211ENST00000613795 VTI1BQ9UEU0 232 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 SPATA31A1Q5TZJ5 1347 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 EMSYQ7Z589 1322 aa7.09□□□□□ -1.28
CLCN3-211ENST00000613795 PIK3CDO00329 1044 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 ZSCAN9O15535 394 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 TRIM13O60858 407 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 LYNP07948 512 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 ETS2P15036 469 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 CDH6P55285 790 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 FOLH1Q04609 750 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 NSUN2Q08J23 767 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 MMRN1Q13201 1228 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 PTPAQ15257 358 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 TIMM50Q3ZCQ8 353 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 SPATA2LQ8IUW3 424 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 HS6ST3Q8IZP7 471 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 CDC26Q8NHZ8 85 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 VPS33AQ96AX1 596 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 KIF12Q96FN5 646 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 CATSPERBQ9H7T0 1116 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 PLEKHA5Q9HAU0 1116 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 CLK4Q9HAZ1 481 aaKnown RBP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 IMPAD1Q9NX62 359 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 USE1Q9NZ43 259 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 KIAA1257Q9ULG3 409 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 SPATA2Q9UM82 520 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 TELO2Q9Y4R8 837 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 SFI1A8K8P3 1242 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 EXTL3O43909 919 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 ENTPD5O75356 428 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 ALDH1A1P00352 501 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 CETPP11597 493 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 AKR1B1P15121 316 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 PIK3R1P27986 724 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 STIP1P31948 543 aaKnown RBP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 TALDO1P37837 337 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 PPP4CP60510 307 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 GTF2H3Q13889 308 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 USP10Q14694 798 aaKnown RBP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 MEA1Q16626 185 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 KCNT1Q5JUK3 1230 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 NT5DC1Q5TFE4 455 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 TMEM110Q86TL2 294 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 OR7A2PQ8NGA2 310 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 ASZ1Q8WWH4 475 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 DYRK4Q9NR20 520 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 CYP26A1O43174 497 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 HBP1O60381 514 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 ZC3H11AO75152 810 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 PLEKP08567 350 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 CPT1AP50416 773 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 ZNF268Q14587 947 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 NFIXQ14938 502 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 TYSND1Q2T9J0 566 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 EGFLAMQ63HQ2 1017 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 USP17L6PQ6QN14 398 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 FBXO33Q7Z6M2 555 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 DHFR2Q86XF0 187 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 DCLK3Q9C098 648 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 RSAD1Q9HA92 442 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 TMEM8AQ9HCN3 771 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 C8orf4Q9NR00 106 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 FAM217BQ9NTX9 383 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-211ENST00000613795 HSPBP1Q9NZL4 362 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 HACL1Q9UJ83 578 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 IGSF9BQ9UPX0 1349 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 A0A087X0T9 212 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 KBTBD13C9JR72 458 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 ZBTB39O15060 712 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 KPNA6O60684 536 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 TNFRSF21O75509 655 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 APRTP07741 180 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 MSL3P1P0C860 447 aa7.08□□□□□ -1.28
CLCN3-211ENST00000613795 FAM228BP0C875 321 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms