RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 TKTL1P51854 596 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 ADIGQ0VDE8 80 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 SGO2Q562F6 1265 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 HSP90AA4PQ58FG1 418 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 C10orf120Q5SQS8 335 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 ZC3H14Q6PJT7 736 aaKnown RBP13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 CLEC17AQ6ZS10 378 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 MIB1Q86YT6 1006 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 NAT16Q8N8M0 369 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 CLEC4CQ8WTT0 213 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 PARD6AQ9NPB6 346 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 SIX2Q9NPC8 291 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 PCDHB4Q9Y5E5 795 aa13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.32□□□□□ -0.28
CHRNA3-208ENST00000561128 BECN2A8MW95 431 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 XPO1O14980 1071 aaKnown RBP13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 HMBSP08397 361 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 PNMA6AP0CW24 399 aaPredicted RBP13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 SLC9A1P19634 815 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 TGM1P22735 817 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 BCAT1P54687 386 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 BST2Q10589 180 aaKnown RBP13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 DDX42Q86XP3 938 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 CCDC33Q8N5R6 958 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 EHBP1Q8NDI1 1231 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 ATRIPQ8WXE1 791 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 SECISBP2LQ93073 1101 aaKnown RBP13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 BHMTQ93088 406 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 TJP2Q9UDY2 1190 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 CYTH4Q9UIA0 394 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 SH3BP1Q9Y3L3 701 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 CFAP54Q96N23 3096 aa13.31□□□□□ -0.28
CHRNA3-208ENST00000561128 YJEFN3A6XGL0 299 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 E7ENQ6 273 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 M0QYV0 167 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 P4HA2O15460 535 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 HOXC11O43248 304 aaPredicted RBP13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 MSI1O43347 362 aaKnown RBP13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 VDRP11473 427 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 DRD1P21728 446 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 TBXAS1P24557 533 aaPredicted RBP13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 ATP5C1P36542 298 aaKnown RBP13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 PLA2G4AP47712 749 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 YWHAGP61981 247 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 EFEMP1Q12805 493 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 DMC1Q14565 340 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 C2orf27AQ580R0 203 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 PM20D1Q6GTS8 502 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 DPY19L2P1Q6NXN4 242 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 PMF1Q6P1K2 205 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 DENND1BQ6P3S1 775 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 LCLAT1Q6UWP7 414 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 TPGS1Q6ZTW0 290 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 TOGARAM2Q6ZUX3 1019 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 HTR3DQ70Z44 454 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 KIAA2013Q8IYS2 634 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 SYNPOQ8N3V7 929 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 EDEM1Q92611 657 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 ERLEC1Q96DZ1 483 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 NACA2Q9H009 215 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 NUP62CLQ9H1M0 184 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 SPHK2Q9NRA0 654 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 CNTN6Q9UQ52 1028 aa13.3□□□□□ -0.28
CHRNA3-208ENST00000561128 FAM186AA6NE01 2351 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 SLC9A3R1O14745 358 aaPredicted RBP13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 DCLK1O15075 740 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 ADAM23O75077 832 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 TULP3O75386 442 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 KAT7O95251 611 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 ZBED1O96006 694 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 ADH1CP00326 375 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 PAEPP09466 180 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 LCP1P13796 627 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 KIR2DL1P43626 348 aaPredicted RBP13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 GCNT1Q02742 428 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 MIIPQ5JXC2 388 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 KLHDC10Q6PID8 442 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 TRIM65Q6PJ69 517 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 WDR5BQ86VZ2 330 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 LONP2Q86WA8 852 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 TTC39CQ8N584 583 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 ALLCQ8N6M5 410 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 KIAA1958Q8N8K9 716 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 SLC35F5Q8WV83 523 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 SEMA4AQ9H3S1 761 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 FAM124BQ9H5Z6 455 aaPredicted RBP13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 ARHGEF4Q9NR80 690 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 CLIC5Q9NZA1 410 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 DNMT3LQ9UJW3 386 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 CLEC4EQ9ULY5 219 aa13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 MUC22E2RYF6 1773 aaPredicted RBP13.29□□□□□ -0.28
CHRNA3-208ENST00000561128 FAM170AA1A519 330 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 NEDD8-MDP1E9PL57 170 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 SGK1O00141 431 aa13.28□□□□□ -0.28
CHRNA3-208ENST00000561128 GNA14O95837 355 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms