RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 SF3A1Q15459 793 aaKnown RBP10.06□□□□□ -0.8
C2CD3-220ENST00000544293 MAPRE1Q15691 268 aaKnown RBP10.06□□□□□ -0.8
C2CD3-220ENST00000544293 ANO4Q32M45 955 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 HECTD3Q5T447 861 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 HTR3DQ70Z44 454 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 HS2ST1Q7LGA3 356 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 RABEPKQ7Z6M1 372 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 METTL3Q86U44 580 aaKnown RBP10.06□□□□□ -0.8
C2CD3-220ENST00000544293 CHPFQ8IZ52 775 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 RGL4Q8IZJ4 473 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 GPD1LQ8N335 351 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 RBBP8NLQ8NC74 664 aaPredicted RBP10.06□□□□□ -0.8
C2CD3-220ENST00000544293 HPS3Q969F9 1004 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 ELMO3Q96BJ8 720 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 TOE1Q96GM8 510 aaKnown RBP10.06□□□□□ -0.8
C2CD3-220ENST00000544293 XYLT2Q9H1B5 865 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 FAM124BQ9H5Z6 455 aaPredicted RBP10.06□□□□□ -0.8
C2CD3-220ENST00000544293 ITM2CQ9NQX7 267 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 OLFML3Q9NRN5 406 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 OSER1Q9NX31 292 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 MARK1Q9P0L2 795 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 USP36Q9P275 1121 aaKnown RBP10.06□□□□□ -0.8
C2CD3-220ENST00000544293 BTBD3Q9Y2F9 522 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 PCDHB9Q9Y5E1 797 aa10.06□□□□□ -0.8
C2CD3-220ENST00000544293 ANK1P16157 1881 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 FAM149AA5PLN7 773 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 METTL12A8MUP2 240 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 CACNG3O60359 315 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 CILPO75339 1184 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 GCNT3O95395 438 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 TMEM191BP0C7N4 346 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 ZNF883P0CG24 379 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 ACO1P21399 889 aaKnown RBP10.05□□□□□ -0.8
C2CD3-220ENST00000544293 CD6P30203 668 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 MYO1EQ12965 1108 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 ENPP2Q13822 863 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 DUOXA2Q1HG44 320 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 HLA-BQ31612 363 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 FUT11Q495W5 492 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 GRAMD4Q6IC98 578 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 TRMT11Q7Z4G4 463 aaKnown RBP10.05□□□□□ -0.8
C2CD3-220ENST00000544293 DDX42Q86XP3 938 aaKnown RBP eCLIP10.05□□□□□ -0.8
C2CD3-220ENST00000544293 ZCCHC9Q8N567 271 aaKnown RBP10.05□□□□□ -0.8
C2CD3-220ENST00000544293 OR6B3Q8NGW1 331 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 OVCA2Q8WZ82 227 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 FBXO32Q969P5 355 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 CLIC6Q96NY7 704 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 SLITRK1Q96PX8 696 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 MMS19Q96T76 1030 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 SMOQ99835 787 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 SDCBP2Q9H190 292 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 GAREM1Q9H706 876 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
C2CD3-220ENST00000544293 DNAJC17Q9NVM6 304 aaKnown RBP10.05□□□□□ -0.8
C2CD3-220ENST00000544293 EHD2Q9NZN4 543 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 GMIPQ9P107 970 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 SEL1LQ9UBV2 794 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 FBXO2Q9UK22 296 aaPredicted RBP10.05□□□□□ -0.8
C2CD3-220ENST00000544293 CLEC4EQ9ULY5 219 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 EXOC7Q9UPT5 735 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 APOBEC2Q9Y235 224 aaKnown RBP10.05□□□□□ -0.8
C2CD3-220ENST00000544293 NFE2L3Q9Y4A8 694 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 CLIC4Q9Y696 253 aa10.05□□□□□ -0.8
C2CD3-220ENST00000544293 ANAPC1Q9H1A4 1944 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 KNL1Q8NG31 2342 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 MYO18AQ92614 2054 aaKnown RBP10.04□□□□□ -0.8
C2CD3-220ENST00000544293 A0A1B0GTW7 788 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 TGFB1I1O43294 461 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 C7P10643 843 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 IRF1P10914 325 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 NCAM1P13591 858 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 TYRP14679 529 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 GAP43P17677 238 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 GJB2P29033 226 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 TUBP50607 506 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 SLC5A3P53794 718 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 CDH8P55286 799 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 PTPRNQ16849 979 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 KCNT1Q5JUK3 1230 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 WDR45BQ5MNZ6 344 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 BTBD8Q5XKL5 378 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 Q6ZNB5 142 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 TPGS1Q6ZTW0 290 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 WDR49Q8IV35 697 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 FUKQ8N0W3 1084 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 B3GALNT2Q8NCR0 500 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 CADM4Q8NFZ8 388 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 PLEKHO2Q8TD55 490 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 SETD7Q8WTS6 366 aaKnown RBP10.04□□□□□ -0.8
C2CD3-220ENST00000544293 FOXJ1Q92949 421 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 ANKRD36BP1Q96IX9 119 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 GPR174Q9BXC1 333 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 ZDHHC5Q9C0B5 715 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 ELOVL4Q9GZR5 314 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 PRDM16Q9HAZ2 1276 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 TM7SF3Q9NS93 570 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 SH3BP1Q9Y3L3 701 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 STON1Q9Y6Q2 735 aa10.04□□□□□ -0.8
C2CD3-220ENST00000544293 ASH1LQ9NR48 2969 aaKnown RBP10.04□□□□□ -0.8
C2CD3-220ENST00000544293 BPTFQ12830 3046 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms