RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 TPMTP51580 245 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 CYP27A1Q02318 531 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 SEMG2Q02383 582 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 KCNA1Q09470 495 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 DHX8Q14562 1220 aaKnown RBP11.9□□□□□ -0.5
RNF4-218ENST00000513284 FUT11Q495W5 492 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 GRAMD4Q6IC98 578 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 SDE2Q6IQ49 451 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 IL27RAQ6UWB1 636 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 GPR155Q7Z3F1 870 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 GPBP1Q86WP2 473 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 DDX42Q86XP3 938 aaKnown RBP eCLIP11.9□□□□□ -0.5
RNF4-218ENST00000513284 MYCBPAPQ8TBZ2 947 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 FAM213AQ9BRX8 229 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 STRA6Q9BX79 667 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 SEMA4CQ9C0C4 833 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 ST6GALNAC4Q9H4F1 302 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 CCSER2Q9H7U1 834 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 DNAJC17Q9NVM6 304 aaKnown RBP11.9□□□□□ -0.5
RNF4-218ENST00000513284 DNMT3LQ9UJW3 386 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 TEX51A0A1B0GUA7 166 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 MEI4A8MW99 385 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 GFRA2O00451 464 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 ZBTB24O43167 697 aaPredicted RBP11.89□□□□□ -0.51
RNF4-218ENST00000513284 CACNG3O60359 315 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 FAM13AO94988 1023 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 RBP5P82980 135 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 RTP5Q14D33 572 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 PREPLQ4J6C6 727 aaPredicted RBP11.89□□□□□ -0.51
RNF4-218ENST00000513284 SNX30Q5VWJ9 437 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 TDRD10Q5VZ19 366 aaKnown RBP11.89□□□□□ -0.51
RNF4-218ENST00000513284 DPH6Q7L8W6 267 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 ZNF720Q7Z2F6 126 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 POMGNT1Q8WZA1 660 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 IL37Q9NZH6 218 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 STON1Q9Y6Q2 735 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 TMEM131Q92545 1883 aa11.89□□□□□ -0.51
RNF4-218ENST00000513284 H0Y8X5 98 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 CBX4O00257 560 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 CLDN5O00501 218 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 ARHGAP6O43182 974 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 PCDHGA12O60330 932 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 PPP1R37O75864 691 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 IGLV3-19P01714 112 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 TYRP14679 529 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 WARSP23381 471 aaKnown RBP11.88□□□□□ -0.51
RNF4-218ENST00000513284 ANXA13P27216 316 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 TARDBPQ13148 414 aaKnown RBP eCLIP11.88□□□□□ -0.51
RNF4-218ENST00000513284 ENPP2Q13822 863 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 MCM6Q14566 821 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 SUZ12Q15022 739 aaKnown RBP11.88□□□□□ -0.51
RNF4-218ENST00000513284 MDH1BQ5I0G3 518 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 LRRC69Q6ZNQ3 347 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 NUDT18Q6ZVK8 323 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 HTR3DQ70Z44 454 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 BRSK2Q8IWQ3 736 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 SCAMP5Q8TAC9 235 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 SAAL1Q96ER3 474 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 MRPL45Q9BRJ2 306 aaKnown RBP11.88□□□□□ -0.51
RNF4-218ENST00000513284 B3GNT5Q9BYG0 378 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 ZNF518BQ9C0D4 1074 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 PDE11AQ9HCR9 933 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 FBXO10Q9UK96 956 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 ITGA11Q9UKX5 1188 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 ANKRD6Q9Y2G4 727 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 SH3BP1Q9Y3L3 701 aa11.88□□□□□ -0.51
RNF4-218ENST00000513284 PTPRJQ12913 1337 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 COL6A6A6NMZ7 2263 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 GOLGA8IPA6NC78 632 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 VWA3AA6NCI4 1184 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 GOLGA8JA6NMD2 632 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 NEDD8-MDP1E9PL57 170 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
RNF4-218ENST00000513284 CAPN9O14815 690 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 TBX18O95935 607 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 KRT19P08727 400 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 ZDHHC11BP0C7U3 371 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 JUPP14923 745 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 ACO1P21399 889 aaKnown RBP11.87□□□□□ -0.51
RNF4-218ENST00000513284 YWHAQP27348 245 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 IL12RB1P42701 662 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 GRK6P43250 576 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 COPAP53621 1224 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 TLE3Q04726 772 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 SRSF1Q07955 248 aaKnown RBP eCLIP11.87□□□□□ -0.514e-6■□□□□ 8.1
RNF4-218ENST00000513284 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
RNF4-218ENST00000513284 SF3A1Q15459 793 aaKnown RBP11.87□□□□□ -0.51
RNF4-218ENST00000513284 HECTD3Q5T447 861 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 LAYNQ6UX15 382 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 TPGS1Q6ZTW0 290 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 TMPRSS6Q8IU80 811 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 FMNL3Q8IVF7 1028 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 NUP93Q8N1F7 819 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 OR5B17Q8NGF7 314 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
RNF4-218ENST00000513284 CACTINQ8WUQ7 758 aaKnown RBP11.87□□□□□ -0.51
RNF4-218ENST00000513284 HPDLQ96IR7 371 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 SLITRK1Q96PX8 696 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 KCNK16Q96T55 309 aa11.87□□□□□ -0.51
RNF4-218ENST00000513284 NUP58Q9BVL2 599 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms