RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 SEMA3CQ99985 751 aa7.8□□□□□ -1.16
COL9A1-209ENST00000489861 TARS2Q9BW92 718 aaKnown RBP7.8□□□□□ -1.16
COL9A1-209ENST00000489861 C6orf106Q9H6K1 298 aaPredicted RBP7.8□□□□□ -1.16
COL9A1-209ENST00000489861 TTC12Q9H892 705 aaPredicted RBP7.8□□□□□ -1.16
COL9A1-209ENST00000489861 SMPD4Q9NXE4 827 aa7.8□□□□□ -1.16
COL9A1-209ENST00000489861 DEC1Q9P2X7 70 aa7.8□□□□□ -1.16
COL9A1-209ENST00000489861 UXTQ9UBK9 157 aaPredicted RBP7.8□□□□□ -1.16
COL9A1-209ENST00000489861 KCNJ14Q9UNX9 436 aa7.8□□□□□ -1.16
COL9A1-209ENST00000489861 PCDHB5Q9Y5E4 795 aa7.8□□□□□ -1.16
COL9A1-209ENST00000489861 APCP25054 2843 aa7.8□□□□□ -1.16
COL9A1-209ENST00000489861 MYH11P35749 1972 aa7.8□□□□□ -1.16
COL9A1-209ENST00000489861 ARHGEF35A5YM69 484 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 PRRT4C9JH25 899 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 K7ERI5 159 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 USP12O75317 370 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 IGLV3-19P01714 112 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 CXCL8P10145 99 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 C7P10643 843 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 CYP2F1P24903 491 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 TNFRSF8P28908 595 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 TRAPPC10P48553 1259 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 NEK4P51957 841 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 EFNA5P52803 228 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 SMARCB1Q12824 385 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 CLN3Q13286 438 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 ILKQ13418 452 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 ZNF787Q6DD87 383 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 SDE2Q6IQ49 451 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 XKR5Q6UX68 686 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 FAM124AQ86V42 546 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 DIS3L2Q8IYB7 885 aaKnown RBP7.79□□□□□ -1.16
COL9A1-209ENST00000489861 LSMEM2Q8N112 164 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 KCTD17Q8N5Z5 321 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 FAM184AQ8NB25 1140 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL9A1-209ENST00000489861 GTF3C6Q969F1 213 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 ORAI3Q9BRQ5 295 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 LLPHQ9BRT6 129 aaKnown RBP7.79□□□□□ -1.16
COL9A1-209ENST00000489861 POLR1BQ9H9Y6 1135 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 OSGEPQ9NPF4 335 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 CFAP97Q9P2B7 532 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 ADAMTS1Q9UHI8 967 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 LIMCH1Q9UPQ0 1083 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.79□□□□□ -1.16
COL9A1-209ENST00000489861 CPQQ9Y646 472 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 CCDC168Q8NDH2 2452 aa7.79□□□□□ -1.16
COL9A1-209ENST00000489861 ABCA2Q9BZC7 2435 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 TTC26A0AVF1 554 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 LAD1O00515 517 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 SLC9A3R1O14745 358 aaPredicted RBP7.78□□□□□ -1.16
COL9A1-209ENST00000489861 HOXC11O43248 304 aaPredicted RBP7.78□□□□□ -1.16
COL9A1-209ENST00000489861 ITGAVP06756 1048 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 SPATA31C1P0DKV0 1188 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 CKMT2P17540 419 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 CYP11B2P19099 503 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 TXKP42681 527 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 VASPP50552 380 aaPredicted RBP7.78□□□□□ -1.16
COL9A1-209ENST00000489861 RPL10AP62906 217 aaKnown RBP7.78□□□□□ -1.16
COL9A1-209ENST00000489861 SLC7A9P82251 487 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 GAD2Q05329 585 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 ST3GAL1Q11201 340 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 CCDC142Q17RM4 750 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 ZSCAN23Q3MJ62 389 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 CDCP2Q5VXM1 449 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 WSCD1Q658N2 575 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 MPZL3Q6UWV2 235 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 CACUL1Q86Y37 369 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 PTRH1Q86Y79 214 aaKnown RBP7.78□□□□□ -1.16
COL9A1-209ENST00000489861 TMEM25Q86YD3 366 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 TMPRSS6Q8IU80 811 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 KIAA1958Q8N8K9 716 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 KIFAP3Q92845 792 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 MMS19Q96T76 1030 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 ELF4Q99607 663 aaPredicted RBP7.78□□□□□ -1.16
COL9A1-209ENST00000489861 ARHGAP9Q9BRR9 750 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 TCHPQ9BT92 498 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 NUP58Q9BVL2 599 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 TRIM9Q9C026 710 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 THSD1Q9NS62 852 aa7.78□□□□□ -1.16
COL9A1-209ENST00000489861 UBQLN1Q9UMX0 589 aaKnown RBP7.78□□□□□ -1.16
COL9A1-209ENST00000489861 PMS2P1A4D2B8 440 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 DFNA5O60443 496 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 PPFIA2O75334 1257 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 OLFM2O95897 454 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 WNT1P04628 370 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 OR52Z1P0C646 297 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 CYP3A5P20815 502 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 ABCB4P21439 1286 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 SCP2P22307 547 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 RPA1P27694 616 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 OXTRP30559 389 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 ACSL1P33121 698 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 ABCD1P33897 745 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 AFMP43652 599 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 FOSBP53539 338 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 BNIP3Q12983 259 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 SRSF6Q13247 344 aaKnown RBP7.77□□□□□ -1.17
COL9A1-209ENST00000489861 ORC1Q13415 861 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 KANSL1Q7Z3B3 1105 aa7.77□□□□□ -1.17
COL9A1-209ENST00000489861 TICAM1Q8IUC6 712 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms