RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CACNA2D3Q8IZS8 1091 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 BBOF1Q8ND07 529 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CHST13Q8NET6 341 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 DNERQ8NFT8 737 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 DEPTORQ8TB45 409 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 RAPGEF5Q92565 580 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CYFIP2Q96F07 1278 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 SNF8Q96H20 258 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF333Q96JL9 665 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 HRASLS5Q96KN8 279 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 XPO6Q96QU8 1125 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CGRRF1Q99675 332 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 FAM213AQ9BRX8 229 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 FOXP3Q9BZS1 431 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 NRSN2Q9GZP1 204 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 PORCNQ9H237 461 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 RABEP2Q9H5N1 569 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CCDC134Q9H6E4 229 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 DHX33Q9H6R0 707 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ACTR5Q9H9F9 607 aaPredicted RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ZFYVE28Q9HCC9 887 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 MRPL47Q9HD33 250 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 PPANQ9NQ55 473 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 A1CFQ9NQ94 594 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF302Q9NR11 478 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 HOXC10Q9NYD6 342 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CYP39A1Q9NYL5 469 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 AGO2Q9UKV8 859 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CNTN6Q9UQ52 1028 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 RIPK3Q9Y572 518 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 PPP2R3BQ9Y5P8 575 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 SCINQ9Y6U3 715 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 EVPLQ92817 2033 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ZDBF2Q9HCK1 2354 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 MCM3APO60318 1980 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 MROH7Q68CQ1 1323 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 LAMA3Q16787 3333 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CITO14578 2027 aa5.21□□□□□ -1.57
SF3B6-202ENST00000478050 GOLGA6L7A0A1B0GV03 622 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ANKRD65E5RJM6 399 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 K7ERI5 159 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 RASGRF2O14827 1237 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CLDN3O15551 220 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 RIPK2O43353 540 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 THAP12O43422 761 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TSPAN15O95858 294 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 SHBGP04278 402 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CLTAP09496 248 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 GHRP10912 638 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ATF2P15336 505 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ACO1P21399 889 aaKnown RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 DRD4P21917 467 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 GLRA2P23416 452 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 RRM1P23921 792 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TMOD1P28289 359 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ARL2P36404 184 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 LIG3P49916 1009 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 SEC24CP53992 1094 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 HMGCS2P54868 508 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 NLRP11P59045 1033 aaKnown RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 NOMO3P69849 1222 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 LMNB2Q03252 620 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 KRT17Q04695 432 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 SREBF2Q12772 1141 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 SLC29A2Q14542 456 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TMEM132BQ14DG7 1078 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ARHGEF6Q15052 776 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TAF1CQ15572 869 aaPredicted RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TNFAIP8L3Q5GJ75 292 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 GKAP1Q5VSY0 366 aaPredicted RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TDRD10Q5VZ19 366 aaKnown RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 FAM160B1Q5W0V3 765 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 PLEKHA7Q6IQ23 1121 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 SLC23A3Q6PIS1 610 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 RHBDF2Q6PJF5 856 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 NXPE4Q6UWF7 544 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ZPBP2Q6X784 338 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 LCNL1Q6ZST4 164 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CCDC121Q6ZUS5 278 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 MON1BQ7L1V2 547 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TRMT1LQ7Z2T5 733 aaKnown RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CPLX4Q7Z7G2 160 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TAX1BP1Q86VP1 789 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 PHF13Q86YI8 300 aaPredicted RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 RASAL3Q86YV0 1011 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 BRSK2Q8IWQ3 736 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 RHOT1Q8IXI2 618 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 KATNAL2Q8IYT4 538 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ABRAQ8N0Z2 381 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CNPY4Q8N129 248 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ATL2Q8NHH9 583 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 EXD1Q8NHP7 514 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CCHCR1Q8TD31 782 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CHMP6Q96FZ7 201 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 WNK4Q96J92 1243 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 SEC16BQ96JE7 1060 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 FAM167AQ96KS9 214 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms