RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 XRCC6P12956 609 aaKnown RBP eCLIP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 HOXB2P14652 356 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 TCEA1P23193 301 aaKnown RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 CCND1P24385 295 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 TBXAS1P24557 533 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 EPHA3P29320 983 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 POLD2P49005 469 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 SLC11A2P49281 568 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 CXCR3P49682 368 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 MTHFSP49914 203 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 FXR1P51114 621 aaKnown RBP eCLIP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 GAS1P54826 345 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 ADKP55263 362 aaKnown RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 DSCR9P59020 149 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 DEUP1Q05D60 604 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 ITKQ08881 620 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 MTA1Q13330 715 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 PLS1Q14651 629 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 ODF1Q14990 250 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 PTPN21Q16825 1174 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 MRGPRG-AS1Q2M3A8 158 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 ABCB5Q2M3G0 1257 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 INAVAQ3KP66 663 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 ODF3L2Q3SX64 289 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 INO80DQ53TQ3 878 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 TMEM63BQ5T3F8 832 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 PRSS57Q6UWY2 283 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 TRAPPC11Q7Z392 1133 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 NPM2Q86SE8 214 aaKnown RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 MORC1Q86VD1 984 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 COL23A1Q86Y22 540 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 ADGRF4Q8IZF3 695 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 MPP5Q8N3R9 675 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 CELF5Q8N6W0 485 aaKnown RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 LINC01465Q8N7H1 131 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 DNAJC5GQ8N7S2 189 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 C12orf76Q8N812 135 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 C11orf44Q8N8P7 122 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 FAM71DQ8N9W8 422 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 SLC44A5Q8NCS7 719 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 NGDNQ8NEJ9 315 aaKnown RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 DNAJB14Q8TBM8 379 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 BPIFB1Q8TDL5 484 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 ELP5Q8TE02 316 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 WIPF2Q8TF74 440 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 PIGKQ92643 395 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 CTHRC1Q96CG8 243 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 SLC35A4Q96G79 324 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 HIC2Q96JB3 615 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 FAM167AQ96KS9 214 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 FCRL5Q96RD9 977 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 MESP1Q9BRJ9 268 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 TM2D2Q9BX73 214 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 SEZ6LQ9BYH1 1024 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 FAM126AQ9BYI3 521 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 MS4A7Q9GZW8 240 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 PUS7LQ9H0K6 701 aaKnown RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 CCDC8Q9H0W5 538 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 CDT1Q9H211 546 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 C6orf106Q9H6K1 298 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 MLXIPLQ9NP71 852 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 FZD3Q9NPG1 666 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 HIF1ANQ9NWT6 349 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 DNMT3BQ9UBC3 853 aaKnown RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 WNT16Q9UBV4 365 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 ASAP1Q9ULH1 1129 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 MYO6Q9UM54 1294 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 PCDHA7Q9UN72 937 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 INSL5Q9Y5Q6 135 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 HEMK1Q9Y5R4 338 aaPredicted RBP0.71□□□□□ -2.3
SNORD28-201ENST00000384706 HMCN1Q96RW7 5635 aa0.71□□□□□ -2.3
SNORD28-201ENST00000384706 TRBV5-3A0A0A0MS03 114 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 SHTN1A0MZ66 631 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 ANTXRLA6NF34 631 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 C16orf96A6NNT2 1141 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 TMEM233B4DJY2 109 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 M0R3H8 397 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 BTN3A1O00481 513 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 PODXLO00592 558 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 PRPF4O43172 522 aaKnown RBP eCLIP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CA12O43570 354 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 TLX3O43711 291 aaPredicted RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 TBC1D4O60343 1298 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 DTNBO60941 627 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 SRGAP2O75044 1071 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 ATG13O75143 517 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 USP12O75317 370 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 SERPINB2P05120 415 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 THP07101 528 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 POU2F2P09086 479 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 HOXC6P09630 235 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CHRNB1P11230 501 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 PKMP14618 531 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CPA1P15085 419 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 ST6GAL1P15907 406 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 YY1P25490 414 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 HOXA7P31268 230 aaPredicted RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 UQCRC1P31930 480 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 PCYT1AP49585 367 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 VPS41P49754 854 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms