RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TRAPPC3O43617 180 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 ZNF189O75820 626 aaPredicted RBP17.95■□□□□ 0.46
VPS13B-201ENST00000355155 ITGB1P05556 798 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 ATF2P15336 505 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 MAP3K7CLP57077 242 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 OTUD4Q01804 1114 aaKnown RBP17.95■□□□□ 0.46
VPS13B-201ENST00000355155 CALCOCO2Q13137 446 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 XRCC4Q13426 336 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 SNX1Q13596 522 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 TCTN1Q2MV58 587 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 ANKRD20A8PQ5CZ79 823 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 C4orf50Q6ZRC1 276 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 ACTL9Q8TC94 416 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 GDAP1L1Q96MZ0 367 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 DEFB118Q96PH6 123 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 ADAM7Q9H2U9 754 aa17.95■□□□□ 0.46
VPS13B-201ENST00000355155 TBC1D4O60343 1298 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 GRAP2O75791 330 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 RDXP35241 583 aaKnown RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 MAGEA11P43364 429 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 CACNA2D1P54289 1103 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 CDH6P55285 790 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 SIX6OS1Q8N1H7 587 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 RNF169Q8NCN4 708 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 TMLHEQ9NVH6 421 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 IL37Q9NZH6 218 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 CALCOCO1Q9P1Z2 691 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 INPP5FQ9Y2H2 1132 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 PCDHB7Q9Y5E2 793 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 TNFRSF10BO14763 440 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 IGLV3-25P01717 112 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 FGFR3P22607 806 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 PLTPP55058 493 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 TSPY1Q01534 308 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 DHX9Q08211 1270 aaKnown RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 FAAP100Q0VG06 881 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 KAZNQ674X7 775 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 ZNF365Q70YC5 407 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 LRRTM3Q86VH5 581 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 HSPH1Q92598 858 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 ACSF2Q96CM8 615 aaPredicted RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 ULBP1Q9BZM6 244 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 NRDE2Q9H7Z3 1164 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 TIMM13Q9Y5L4 95 aaPredicted RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 BCLAF3A2AJT9 711 aaKnown RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 CFAP69A5D8W1 941 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 TFE3P19532 575 aaPredicted RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 STIP1P31948 543 aaKnown RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 NR2C2P49116 596 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 PMS2P54278 862 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 YWHAHQ04917 246 aaPredicted RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 PCGF5Q86SE9 256 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 CROCCP2Q86T23 111 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 PLD5Q8N7P1 536 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 ARMC5Q96C12 935 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 COMMD8Q9NX08 183 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 TBX21Q9UL17 535 aa17.94■□□□□ 0.46
VPS13B-201ENST00000355155 FARP1Q9Y4F1 1045 aaPredicted RBP17.94■□□□□ 0.46
VPS13B-201ENST00000355155 NRP1O14786 923 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 ZBED1O96006 694 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 HCAR3P49019 387 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 SMARCB1Q12824 385 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 MORF4L2Q15014 288 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 GPRIN1Q7Z2K8 1008 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 HOOK3Q86VS8 718 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 RFX6Q8HWS3 928 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 PCDH19Q8TAB3 1148 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 TRIM31Q9BZY9 425 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 TMBIM4Q9HC24 238 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 NGRNQ9NPE2 291 aaKnown RBP17.93■□□□□ 0.46
VPS13B-201ENST00000355155 PLAAQ9Y263 795 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 OR6C75A6NL08 312 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 ATP11AP98196 1134 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 SEMA3BQ13214 749 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 AGBL2Q5U5Z8 902 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 C4orf22Q6V702 233 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 DCP1BQ8IZD4 617 aaKnown RBP17.93■□□□□ 0.46
VPS13B-201ENST00000355155 ZCCHC9Q8N567 271 aaKnown RBP17.93■□□□□ 0.46
VPS13B-201ENST00000355155 ZNF333Q96JL9 665 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 C8orf48Q96LL4 319 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 WDR6Q9NNW5 1121 aaKnown RBP17.93■□□□□ 0.46
VPS13B-201ENST00000355155 MARCH5Q9NX47 278 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 ASIC3Q9UHC3 531 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 SHOC2Q9UQ13 582 aa17.93■□□□□ 0.46
VPS13B-201ENST00000355155 RNF40O75150 1001 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 NDUFV1P49821 464 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 ITGA8P53708 1063 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 CA9Q16790 459 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 VSTM1Q6UX27 236 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 GOLGA6L1Q8N7Z2 621 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 CCDC114Q96M63 670 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 CEP295NLQ96MC4 621 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 AP4E1Q9UPM8 1137 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 APOL1O14791 398 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 F9P00740 461 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 LTFP02788 710 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 MAGEA6P43360 314 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 SULT1E1P49888 294 aa17.92■□□□□ 0.46
VPS13B-201ENST00000355155 ELAVL2Q12926 359 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms